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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30795.Seq
         (698 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p...   136   3e-33
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ...   128   6e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc...   115   6e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M...   113   2e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce...    95   1e-20
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch...    51   1e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom...    42   1e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe...    30   0.37 
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    29   0.64 
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar...    29   0.85 
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    28   1.5  
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo...    27   3.4  
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar...    26   6.0  
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co...    25   7.9  

>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 647

 Score =  136 bits (329), Expect = 3e-33
 Identities = 62/87 (71%), Positives = 73/87 (83%)
 Frame = +2

Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXKPKIKVAYKGEDKTFFPEEVSSM 427
           P +TIFDAKRLIGRKF+D  VQ+DMKHWPF+V+S   KP ++V YKGE KTF PEE+SSM
Sbjct: 61  PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120

Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
           VL KM+ETAEAYLG  V +AV+TVPAY
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAY 147



 Score =  113 bits (271), Expect = 3e-26
 Identities = 54/62 (87%), Positives = 57/62 (91%)
 Frame = +1

Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 690
           NDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+   GE NVLIFDLGGGTFDVS+L
Sbjct: 149 NDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLL 208

Query: 691 TI 696
           TI
Sbjct: 209 TI 210



 Score =  112 bits (270), Expect = 4e-26
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = +3

Query: 78  AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 254
           ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+
Sbjct: 4   SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPH 62


>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 644

 Score =  128 bits (310), Expect = 6e-31
 Identities = 58/87 (66%), Positives = 71/87 (81%)
 Frame = +2

Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXKPKIKVAYKGEDKTFFPEEVSSM 427
           P +TIFDAKRLIGR+F D  VQ+DMKHWPF+V+    KP I+V +KGE KTF PEE+SSM
Sbjct: 61  PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120

Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
           VL KM+E+AEA+LG  V +AV+TVPAY
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAY 147



 Score =  112 bits (270), Expect = 4e-26
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = +3

Query: 78  AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 254
           ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+
Sbjct: 4   SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPH 62



 Score =  109 bits (263), Expect = 3e-25
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = +1

Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 690
           NDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+    E NVLIFDLGGGTFDVS+L
Sbjct: 149 NDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLL 208

Query: 691 TI 696
           TI
Sbjct: 209 TI 210


>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 613

 Score =  115 bits (277), Expect = 6e-27
 Identities = 52/87 (59%), Positives = 67/87 (77%)
 Frame = +2

Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXKPKIKVAYKGEDKTFFPEEVSSM 427
           P++T+FDAKRLIGR++ED   Q D+KHWPF+V+ +   P I+V Y GE K F  +E+S+M
Sbjct: 65  PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124

Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
           VLTKMKE +EA L K V+ AVITVPAY
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAY 151



 Score =  103 bits (246), Expect = 3e-23
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = +1

Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 690
           +DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K    +NVLIFDLGGGTFDVS+L
Sbjct: 153 SDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLL 212

Query: 691 TI 696
            I
Sbjct: 213 KI 214



 Score =  100 bits (240), Expect = 2e-22
 Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
 Frame = +3

Query: 78  AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-N 254
           A+GIDLGTTYSCV V++   VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8   AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67

Query: 255 TQY 263
           T +
Sbjct: 68  TVF 70


>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 663

 Score =  113 bits (273), Expect = 2e-26
 Identities = 50/87 (57%), Positives = 70/87 (80%)
 Frame = +2

Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXKPKIKVAYKGEDKTFFPEEVSSM 427
           P++TIFD KRLIGRKF++ T+  D+K +PF +V+D  +P ++V   G+ K F PEE+S+M
Sbjct: 94  PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153

Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
           +L+KMK+TAEAYLGK V +AV+TVPAY
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAY 180



 Score =  103 bits (247), Expect = 2e-23
 Identities = 47/62 (75%), Positives = 59/62 (95%)
 Frame = +1

Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 690
           ND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK  T E++++++DLGGGTFDVS+L
Sbjct: 182 NDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLL 240

Query: 691 TI 696
           +I
Sbjct: 241 SI 242



 Score = 98.7 bits (235), Expect = 7e-22
 Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = +3

Query: 81  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-NT 257
           +GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ   NP NT
Sbjct: 38  IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97

Query: 258 QYSM 269
            + +
Sbjct: 98  IFDI 101


>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 674

 Score = 94.7 bits (225), Expect = 1e-20
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = +1

Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 690
           NDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK   +  V +FDLGGGTFD+SIL
Sbjct: 195 NDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTFDISIL 252

Query: 691 TI 696
            +
Sbjct: 253 EL 254



 Score = 82.6 bits (195), Expect = 5e-17
 Identities = 38/87 (43%), Positives = 56/87 (64%)
 Frame = +2

Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXKPKIKVAYKGEDKTFFPEEVSSM 427
           P++T F  KRLIGR+F++  VQ D+K  P+++V            +   KT+ P ++   
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166

Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
           +L+KM+ETA  YLGK V+NAV+TVPAY
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAY 193



 Score = 73.7 bits (173), Expect = 2e-14
 Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
 Frame = +3

Query: 69  KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
           K P +GIDLGTT SC+ + +    ++IAN +G RTTPS VAFT D ERL+G +AK Q  +
Sbjct: 49  KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108

Query: 246 NPNTQY 263
           NP   +
Sbjct: 109 NPENTF 114


>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
           Pss1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 720

 Score = 51.2 bits (117), Expect = 1e-07
 Identities = 21/61 (34%), Positives = 39/61 (63%)
 Frame = +3

Query: 66  AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 245
           ++   VGID G + + + V ++  +++I N+  NR+TPS V++ +  R +G+AAK+  A 
Sbjct: 3   SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62

Query: 246 N 248
           N
Sbjct: 63  N 63



 Score = 49.2 bits (112), Expect = 6e-07
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
 Frame = +1

Query: 514 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDV 681
           D QR+A  +A  I+GLN LR++N+  AAA+ YG+ K    E    R V I D G   + V
Sbjct: 154 DIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSV 213

Query: 682 SIL 690
           SI+
Sbjct: 214 SIV 216



 Score = 38.3 bits (85), Expect = 0.001
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +2

Query: 251 QHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS--DGXKPKIKVAYKGEDKTFFPEEVSS 424
           ++T+   KRL GR ++D  ++    ++    ++  DG     KV Y  E+  F   ++ +
Sbjct: 65  RNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGA-KVQYLNEETAFSNIQLIA 123

Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPAY 508
              TK+K  AEA L  +V + VI++PA+
Sbjct: 124 AYFTKIKAIAEAELIGSVSDVVISIPAW 151


>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 566

 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +3

Query: 81  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 248
           +GI  G   S +   + GK +++AN++GNR  PS +++   +   G  A+ Q+  N
Sbjct: 27  IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82



 Score = 30.3 bits (65), Expect = 0.28
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 389 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
           ++K     E S   L ++ E+AE +LG  V   V++VP Y
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVY 173


>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 848

 Score = 29.9 bits (64), Expect = 0.37
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +3

Query: 81  VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNT 257
           + ID GT ++   + + G  +EI+      R   S VAF   ER+ G  A N     P  
Sbjct: 25  LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFP-- 82

Query: 258 QYSMPNV 278
            +S+ NV
Sbjct: 83  AHSIRNV 89



 Score = 27.1 bits (57), Expect = 2.6
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 PQHTIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGXKPKIKVAYK-GEDKTFFPEEVS 421
           P H+I + K L+     E   VQ     +P   + +  +    +++   +++ +  EE+ 
Sbjct: 82  PAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEII 141

Query: 422 SMVLTKMKETAEAYLGKTVQNAVITVPAY 508
           +M +      AE    + + + V+TVP +
Sbjct: 142 AMTMEHYISLAEEMAHEKITDLVLTVPPH 170


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 32/154 (20%), Positives = 64/154 (41%), Gaps = 11/154 (7%)
 Frame = -3

Query: 669  TAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTVI 490
            +++ +   + S SS L   T S  S+S  I  S        +  F   S        + I
Sbjct: 565  SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSASTSSPSSISSSI 618

Query: 489  TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPL-----------YATLILGLXPSLT 343
            ++  T+L     + S + +S+  + S    +LSS +           Y++ ++    +L 
Sbjct: 619  SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLV 678

Query: 342  TSKGQCFMSACTVASSNLRPMRRLASNIVCWGSS 241
            +S     +S+  VASS+  P+   +S +  + +S
Sbjct: 679  SSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSAS 712


>SPAC25B8.04c |||mitochondrial splicing suppressor
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 378

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 168
           HP   S W+P    LVS+    W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314


>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 3971

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
 Frame = -3

Query: 669  TAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTVI 490
            T++ V +     +S+  V T +  +SS  ++ S  + +         ++   +  + T I
Sbjct: 3241 TSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 3300

Query: 489  TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLXPSLTTSKGQCFMSAC 310
            T+  T+        S +  S+  +TSS     S+P+ ++ +L    ++T+S      S+ 
Sbjct: 3301 TSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSS--SILNSST 3358

Query: 309  TVASSN-LRPMRRLASNIVCWGSSP 238
             V SS+ L     + S+ V   S+P
Sbjct: 3359 PVTSSSVLNSSTPITSSTVVNSSTP 3383



 Score = 25.8 bits (54), Expect = 6.0
 Identities = 30/144 (20%), Positives = 62/144 (43%)
 Frame = -3

Query: 669  TAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTVI 490
            T++ V +     +S+  V + +  +SS  ++ S  + +         ++   +  + T I
Sbjct: 829  TSSTVVNTSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 888

Query: 489  TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLXPSLTTSKGQCFMSAC 310
            T+   V        S +  S+  +TSS     S+P+ ++ +L     +T+S G    +  
Sbjct: 889  TSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTGLNTSTPI 948

Query: 309  TVASSNLRPMRRLASNIVCWGSSP 238
            T +SS L     + S+ V   S+P
Sbjct: 949  T-SSSVLNSSTPITSSTVLNSSTP 971


>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2244

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 177  PSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLC 311
            P  +A T  ER++  AAK   A+N    Y++  ++ D   K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296


>SPAC823.11 |||sphingosine-1-phosphate phosphatase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 411

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 159 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 1
           G W  SP S +  H   ++++  +F +RVL   C+      L  K  +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323


>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 675

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 222 AAKNQVAMNPNTQYSMPNVSSDVSSKML 305
           A K Q+ +NP   + +PNV  D  + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,995,235
Number of Sequences: 5004
Number of extensions: 64059
Number of successful extensions: 232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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