Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30793.Seq
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 200 4e-51
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 196 5e-50
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 196 5e-50
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 196 5e-50
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 196 5e-50
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 196 9e-50
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 81 3e-15
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 38 0.029
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 38 0.029
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 38 0.029
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 38 0.029
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 37 0.088
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 37 0.088
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 37 0.088
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 37 0.088
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 36 0.12
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 36 0.12
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 36 0.12
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 36 0.12
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 36 0.12
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 33 1.1
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 33 1.1
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 33 1.1
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 33 1.1
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 33 1.1
AB065574-1|BAC05807.1| 337|Homo sapiens seven transmembrane hel... 33 1.4
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 30 7.7
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 30 7.7
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 30 7.7
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 30 7.7
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 30 7.7
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 30 7.7
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 30 7.7
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 30 7.7
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 200 bits (488), Expect = 4e-51
Identities = 100/178 (56%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G K + H + +
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVE---FKVVETHPSPYC 174
Query: 583 LIP*YTV---DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
++ TV +GEPIKRE+EEE+LN VGYDDIGGCRK +++EMVELPLRHP+LFK
Sbjct: 175 IVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLA-QIKEMVELPLRHPALFK 231
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 196 bits (479), Expect = 5e-50
Identities = 99/178 (55%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G K + + +
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVE---FKVVETDPSPYC 174
Query: 583 LIP*YTV---DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
++ TV +GEPIKRE+EEE+LN VGYDDIGGCRK +++EMVELPLRHP+LFK
Sbjct: 175 IVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLA-QIKEMVELPLRHPALFK 231
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 196 bits (479), Expect = 5e-50
Identities = 99/178 (55%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G K + + +
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVE---FKVVETDPSPYC 174
Query: 583 LIP*YTV---DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
++ TV +GEPIKRE+EEE+LN VGYDDIGGCRK +++EMVELPLRHP+LFK
Sbjct: 175 IVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLA-QIKEMVELPLRHPALFK 231
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 196 bits (479), Expect = 5e-50
Identities = 99/178 (55%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G K + + +
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVE---FKVVETDPSPYC 174
Query: 583 LIP*YTV---DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
++ TV +GEPIKRE+EEE+LN VGYDDIGGCRK +++EMVELPLRHP+LFK
Sbjct: 175 IVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLA-QIKEMVELPLRHPALFK 231
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 196 bits (479), Expect = 5e-50
Identities = 99/178 (55%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G K + + +
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVE---FKVVETDPSPYC 174
Query: 583 LIP*YTV---DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
++ TV +GEPIKRE+EEE+LN VGYDDIGGCRK +++EMVELPLRHP+LFK
Sbjct: 175 IVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLA-QIKEMVELPLRHPALFK 231
Score = 101 bits (241), Expect = 4e-21
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 196 bits (477), Expect = 9e-50
Identities = 97/167 (58%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Frame = +1
Query: 256 CIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTG 435
CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TG
Sbjct: 7 CIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITG 66
Query: 436 NLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWLLIP*YTV---D 606
NLFEVYLKPYF+EAYRPI + D F G K + + + ++ TV +
Sbjct: 67 NLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVE---FKVVETDPSPYCIVAPDTVIHCE 123
Query: 607 GEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
GEPIKRE+EEE+LN VGYDDIGGCRK +++EMVELPLRHP+LFK
Sbjct: 124 GEPIKREDEEESLNEVGYDDIGGCRKQLA-QIKEMVELPLRHPALFK 169
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
+GEPIKRE+EEE+LN VGYDDIGGCRK +++EMVELPLRHP+LFK
Sbjct: 23 EGEPIKREDEEESLNEVGYDDIGGCRKQLA-QIKEMVELPLRHPALFK 69
Score = 52.4 bits (120), Expect = 2e-06
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3
Query: 537 FKVVETDPSPFCIVAPDTVIHC 602
FKVVETDPSP+CIVAPDTVIHC
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHC 22
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 38.3 bits (85), Expect = 0.029
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 652 VGYDDIGGCRKTTGRKLREMVELPLRHPSLF 744
V Y D+GGC++ KLRE+VE PL HP F
Sbjct: 172 VTYSDVGGCKEQI-EKLREVVETPLLHPERF 201
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 38.3 bits (85), Expect = 0.029
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 652 VGYDDIGGCRKTTGRKLREMVELPLRHPSLF 744
V Y D+GGC++ KLRE+VE PL HP F
Sbjct: 172 VTYSDVGGCKEQI-EKLREVVETPLLHPERF 201
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 38.3 bits (85), Expect = 0.029
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 652 VGYDDIGGCRKTTGRKLREMVELPLRHPSLF 744
V Y D+GGC++ KLRE+VE PL HP F
Sbjct: 148 VTYSDVGGCKEQI-EKLREVVETPLLHPERF 177
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 38.3 bits (85), Expect = 0.029
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 652 VGYDDIGGCRKTTGRKLREMVELPLRHPSLF 744
V Y D+GGC++ KLRE+VE PL HP F
Sbjct: 172 VTYSDVGGCKEQI-EKLREVVETPLLHPERF 201
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 36.7 bits (81), Expect = 0.088
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 619 KREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
K +E++ V YD IGG + +RE++ELPL+ P LFK
Sbjct: 338 KNSKEQDNQFKVTYDMIGGLSSQL-KAIREIIELPLKQPELFK 379
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 36.7 bits (81), Expect = 0.088
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 619 KREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
K +E++ V YD IGG + +RE++ELPL+ P LFK
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQL-KAIREIIELPLKQPELFK 380
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 36.7 bits (81), Expect = 0.088
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 619 KREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
K +E++ V YD IGG + +RE++ELPL+ P LFK
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQL-KAIREIIELPLKQPELFK 380
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 36.7 bits (81), Expect = 0.088
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 619 KREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
K +E++ V YD IGG + +RE++ELPL+ P LFK
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQL-KAIREIIELPLKQPELFK 380
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 610 EPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
+P+ E V Y +IGG + R+LRE++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQI-RELREVIELPLTNPELFQ 160
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 610 EPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
+P+ E V Y +IGG + R+LRE++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQI-RELREVIELPLTNPELFQ 160
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 610 EPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
+P+ E V Y +IGG + R+LRE++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQI-RELREVIELPLTNPELFQ 160
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 610 EPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
+P+ E V Y +IGG + R+LRE++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQI-RELREVIELPLTNPELFQ 160
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 610 EPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
+P+ E V Y +IGG + R+LRE++ELPL +P LF+
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQI-RELREVIELPLTNPELFQ 160
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 658 YDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
Y+ IGG K ++++E++ELP++HP LF+
Sbjct: 148 YEMIGGLDKQI-KEIKEVIELPVKHPELFE 176
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 658 YDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
Y+ IGG K ++++E++ELP++HP LF+
Sbjct: 148 YEMIGGLDKQI-KEIKEVIELPVKHPELFE 176
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 658 YDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
Y+ IGG K ++++E++ELP++HP LF+
Sbjct: 148 YEMIGGLDKQI-KEIKEVIELPVKHPELFE 176
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 658 YDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
Y+ IGG K ++++E++ELP++HP LF+
Sbjct: 148 YEMIGGLDKQI-KEIKEVIELPVKHPELFE 176
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 658 YDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
Y+ IGG K ++++E++ELP++HP LF+
Sbjct: 22 YEMIGGLDKQI-KEIKEVIELPVKHPELFE 50
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 658 YDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
Y+ IGG K ++++E++ELP++HP LF+
Sbjct: 144 YEMIGGLDKQI-KEIKEVIELPVKHPELFE 172
>AB065574-1|BAC05807.1| 337|Homo sapiens seven transmembrane helix
receptor protein.
Length = 337
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 440 YSKYT*SRTSWRLTVRSIVTTPSGPRGHARRRVQSGRNRSITILHRG 580
Y++ ++ +W L+ R++ PSG R +RR +SG+ RS++ + +G
Sbjct: 24 YTRSCPTQRAWTLSHRALTVQPSGKRSGVQRR-KSGQPRSLSTMAQG 69
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
D +P+ + E Y DIGG ++++E VELPL HP ++
Sbjct: 166 DTDPLVTVMKVEKAPQETYADIGGLDNQI-QEIKESVELPLTHPEYYE 212
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
D +P+ + E Y DIGG ++++E VELPL HP ++
Sbjct: 166 DTDPLVTVMKVEKAPQETYADIGGLDNQI-QEIKESVELPLTHPEYYE 212
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
D +P+ + E Y DIGG ++++E VELPL HP ++
Sbjct: 166 DTDPLVTVMKVEKAPQETYADIGGLDNQI-QEIKESVELPLTHPEYYE 212
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
D +P+ + E Y DIGG ++++E VELPL HP ++
Sbjct: 166 DTDPLVTVMKVEKAPQETYADIGGLDNQI-QEIKESVELPLTHPEYYE 212
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
D +P+ + E Y DIGG ++++E VELPL HP ++
Sbjct: 166 DTDPLVTVMKVEKAPQETYADIGGLDNQI-QEIKESVELPLTHPEYYE 212
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
D +P+ + E Y DIGG ++++E VELPL HP ++
Sbjct: 166 DTDPLVTVMKVEKAPQETYADIGGLDNQI-QEIKESVELPLTHPEYYE 212
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
D +P+ + E Y DIGG ++++E VELPL HP ++
Sbjct: 166 DTDPLVTVMKVEKAPQETYADIGGLDNQI-QEIKESVELPLTHPEYYE 212
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 604 DGEPIKREEEEEALNAVGYDDIGGCRKTTGRKLREMVELPLRHPSLFK 747
D +P+ + E Y DIGG ++++E VELPL HP ++
Sbjct: 166 DTDPLVTVMKVEKAPQETYADIGGLDNQI-QEIKESVELPLTHPEYYE 212
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,039,882
Number of Sequences: 237096
Number of extensions: 2268134
Number of successful extensions: 4849
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4826
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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