Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30789.Seq
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   5.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.5  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 PFRWCISRKGHRPRES 172
           PF+W   +K  R RES
Sbjct: 323 PFKWLFKKKKRRNRES 338


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 332 GHAVGDIPGVR 364
           G AVGD+PG+R
Sbjct: 62  GTAVGDVPGLR 72


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 446 CTPMILVAPFSLCRERGET 390
           C P + V P   C E G T
Sbjct: 163 CDPAVCVLPDCFCSEDGTT 181


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 551 FFFFFCCTQYLLCTRILHFMNL*TTR 474
           FFF FCC  + +        NL T++
Sbjct: 11  FFFSFCCILFFIYLYWQQTSNLTTSK 36


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 550 FFFFFAVHNIYYVLEFYIL 494
           + FFF + ++ YV+  Y+L
Sbjct: 275 YVFFFHLSDVRYVMVVYLL 293


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -1

Query: 553 FFFFFFAVHNIYYVLEFYIL*TYKQRASRQQVTYHNV 443
           +++ FF VH  Y V+  Y +    +++    +  H V
Sbjct: 116 YYYAFFGVHLAYGVVIIYSICVQTEKSVFDFLCRHTV 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,031
Number of Sequences: 336
Number of extensions: 3132
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)