Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30787.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 142 6e-33
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 136 5e-31
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 122 6e-27
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 121 2e-26
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 119 8e-26
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 119 8e-26
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 3e-16
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 84 3e-15
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 79 1e-13
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 73 5e-12
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 73 5e-12
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 73 7e-12
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 72 2e-11
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 72 2e-11
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 70 5e-11
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 65 2e-09
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 64 2e-09
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 56 8e-07
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 53 6e-06
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 51 3e-05
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 49 1e-04
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 44 0.003
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 44 0.004
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 42 0.011
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 42 0.011
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 36 0.72
UniRef50_Q5P4J2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.96
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 0.96
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 36 1.3
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 1.7
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 35 1.7
UniRef50_Q6AJ50 Cluster: Probable murein precusor biosynthesis b... 35 2.2
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 2.2
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 34 2.9
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 33 8.9
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 33 8.9
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 142 bits (345), Expect = 6e-33
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = -1
Query: 467 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 4e-14
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 136 bits (329), Expect = 5e-31
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = -1
Query: 467 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 184 IVVNLTGRLNK 194
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/46 (67%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARR
Sbjct: 196 GVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARR 241
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 122 bits (295), Expect = 6e-27
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -1
Query: 446 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 267
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 266 RLNK 255
RLNK
Sbjct: 234 RLNK 237
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+
Sbjct: 239 GVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQ 284
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 121 bits (291), Expect = 2e-26
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -1
Query: 467 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 287 IVVNLTGRLNK 255
IVV L GRLNK
Sbjct: 61 IVVELNGRLNK 71
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/46 (78%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 119 bits (286), Expect = 8e-26
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = -1
Query: 473 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 294
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 293 GKIVVNLTGRLNK 255
GK+VVNLTGRLNK
Sbjct: 157 GKMVVNLTGRLNK 169
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/46 (67%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+
Sbjct: 171 GVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 119 bits (286), Expect = 8e-26
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = -1
Query: 467 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 287 IVVNLTGRLNK 255
+VV LT RLNK
Sbjct: 60 MVVYLTDRLNK 70
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARR
Sbjct: 72 GVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARR 117
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 3e-16
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1
Query: 473 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 336
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 50.8 bits (116), Expect(2) = 3e-16
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -1
Query: 335 GYIGEFEIVDDHRAGKIVVNLTGRLNK 255
GYI EFE +DDHRAGKIVV L GR+NK
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINK 133
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = -1
Query: 467 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 287 IVVNLTGRLNK 255
I+V L GR+NK
Sbjct: 61 IIVQLLGRINK 71
Score = 33.9 bits (74), Expect = 3.9
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = -3
Query: 252 GVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARR 118
G ISPR+ + N + R + LPS++ G ++++T G+M H + R
Sbjct: 73 GPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIR 121
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = -1
Query: 467 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 287 IVVNLTGRLNK 255
V L GR+NK
Sbjct: 61 YRVQLLGRINK 71
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 258 QGGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 124
+ G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEA 116
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = +1
Query: 520 YPIRPIVSRITIHWAVVLQRRDWENPGVTQLNRLAAHPPFASWGNS 657
YP+ +S AVVLQRRDWENPGVTQLNRLAAHPPFASW NS
Sbjct: 55 YPLVKALSESYYGLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNS 100
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = -1
Query: 452 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 273
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 272 TGRLN 258
GR+N
Sbjct: 65 QGRVN 69
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 237 RFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 124
R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA
Sbjct: 77 RQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEA 115
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 538 VSRITIHWAVVLQRRDWENPGVTQLNRLAAHPPFASWGNS 657
++ IT AVVLQRRDWENPGVTQLNRLAAHPPFASW NS
Sbjct: 1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNS 40
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 72.9 bits (171), Expect = 7e-12
Identities = 32/45 (71%), Positives = 35/45 (77%)
Frame = +1
Query: 523 PIRPIVSRITIHWAVVLQRRDWENPGVTQLNRLAAHPPFASWGNS 657
P+ ++ AVVLQRRDWENPGVTQLNRLAAHPPFASW NS
Sbjct: 14 PLESTCRHASLALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNS 58
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 563 PSFYNVVTGKTLALPNLIALQHIPLSPAGVIAEE 664
PSFYNVVTGKTLALPNLIALQHIPLSPAGVI+EE
Sbjct: 7 PSFYNVVTGKTLALPNLIALQHIPLSPAGVISEE 40
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 562 AVVLQRRDWENPGVTQLNRLAAHPPFASWGNS 657
AVVLQRRDWENPGVTQLNRLAAHPPFASW NS
Sbjct: 23 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNS 54
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = -1
Query: 467 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 287 IVVNLTGRLNK 255
V L GR+NK
Sbjct: 61 YSVTLVGRINK 71
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 121
G I PR+ V ERW LP++ FG L+LTTS G+M EAR
Sbjct: 73 GAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEAR 117
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/65 (43%), Positives = 46/65 (70%)
Frame = -1
Query: 449 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 270
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 269 GRLNK 255
GRLN+
Sbjct: 65 GRLNR 69
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEE 127
G ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E
Sbjct: 71 GAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKE 113
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -1
Query: 458 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 279
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 278 NLTGRLN 258
L+G +N
Sbjct: 63 ELSGNIN 69
Score = 40.3 bits (90), Expect = 0.044
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARR 118
G I PRF + + E + LP+R FG L+++T+ G+M ++AR+
Sbjct: 72 GAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARK 117
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = -1
Query: 467 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 287 IVVNLTGRLNK 255
V+L ++ K
Sbjct: 61 FSVHLLAKITK 71
Score = 40.3 bits (90), Expect = 0.044
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 124
G ISPRF V + W LPS G LV+TT+ G+M H EA
Sbjct: 73 GAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEA 116
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = -1
Query: 473 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 294
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 293 GKIVVNLTGRLNK 255
GK V L G +N+
Sbjct: 76 GKFEVELKGAINE 88
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 121
G + PR+ ++ E+W LP+R +G L++TTS G+M H EAR
Sbjct: 90 GAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAR 134
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 50.8 bits (116), Expect = 3e-05
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 568 VLQRRDWENPGVTQLNRLAAHPPFASW 648
+L RRDWENP +TQ +RL AHPPF SW
Sbjct: 18 ILSRRDWENPQITQYHRLEAHPPFHSW 44
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+
Sbjct: 72 GVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +1
Query: 568 VLQRRDWENPGVTQLNRLAAHPPFASW 648
VL R DW N +T LNRL AHP FASW
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASW 43
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/67 (26%), Positives = 37/67 (55%)
Frame = -1
Query: 455 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 276
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 275 LTGRLNK 255
L+ N+
Sbjct: 64 LSEYFNE 70
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -3
Query: 258 QGGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 121
+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAK 116
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 43.2 bits (97), Expect = 0.006
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 562 AVVLQRRDWENPGVTQLNRLAAHPPFASWGNSRR 663
A +L R DW+NP +T +NRL +H P W ++ R
Sbjct: 19 ATILARNDWQNPAITSVNRLPSHTPLHGWRDADR 52
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -1
Query: 329 IGEFEIVDDHRAGKIVVNLTGRLNKVVS 246
IG+FE++DDHRAGKIV NL+ ++ +V S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 42.3 bits (95), Expect = 0.011
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 388 MRTCLFPRFSALCIDFKASLN-TFIRTMAKI*LALRSEPN*RGARYPIRPIVSRITIHWA 564
M++ LF ++ + ++ ++ T R+++K +++ S P GAR PI P I A
Sbjct: 1 MKSVLFADWTCMTRNYNLPVHSTPNRSVSKY-ISILSNPG--GARDPISPKGGPNKISGA 57
Query: 565 VVLQRRDWENPGVTQLNRLAAHPPFASWGNSRRGP 669
L+RR+ +NPG QLN L A P F +++ P
Sbjct: 58 AFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAP 92
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 36.3 bits (80), Expect = 0.72
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -1
Query: 359 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNK 255
F+TV MK G+FEIVD+ G+I V+L G LNK
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNK 34
>UniRef50_Q5P4J2 Cluster: Putative uncharacterized protein; n=1;
Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 948
Score = 35.9 bits (79), Expect = 0.96
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -1
Query: 689 LGRAIGAGPLRLLPQLAKGGCAARRLSWVTP 597
+GRAIG G L LLP LA G AR W+ P
Sbjct: 326 IGRAIGLGSLVLLPPLASGFVLARTQLWIPP 356
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 0.96
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 568 VLQRRDWENPGVTQLNRLAAHPP 636
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 35.5 bits (78), Expect = 1.3
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -1
Query: 449 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 270
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 269 GRLNKVVSFXLVLM-FPSTILK 207
NKVV+ + L+ PS I K
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKK 85
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -1
Query: 455 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 312
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 35.1 bits (77), Expect = 1.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 568 VLQRRDWENPGVTQLNRLAAHPP 636
++ RRDWENP Q+N++ AH P
Sbjct: 7 IINRRDWENPITVQVNQVKAHSP 29
>UniRef50_Q6AJ50 Cluster: Probable murein precusor biosynthesis
bifunctional protein; n=1; Desulfotalea psychrophila|Rep:
Probable murein precusor biosynthesis bifunctional
protein - Desulfotalea psychrophila
Length = 1014
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = -1
Query: 542 LTIGRIGYRAPRQFGSLRSAS*ILAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIV 363
L +G A RQ GSL + ++ + + L+ GK QVL+ P + I+
Sbjct: 919 LELGEFAEEAHRQIGSLAGELSLDYLLIVGEFASFLQQAALNSGMGKEQVLVFPSKEAII 978
Query: 362 KFLTVMMKHGYIGEFEIV 309
+L G +GE +IV
Sbjct: 979 DWLQAYQADGGLGEKDIV 996
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -1
Query: 449 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 318
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = -1
Query: 449 LSDALKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIVDDHRAGKIV 282
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 281 VNLTGRLNKVVSFXLVLMFPSTILKDGLIC 192
+ +N L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 6.7
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +2
Query: 392 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 508
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 464 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 294
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza
sativa|Rep: Os01g0153200 protein - Oryza sativa subsp.
japonica (Rice)
Length = 1139
Score = 32.7 bits (71), Expect = 8.9
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
Frame = -1
Query: 311 VDDHRAGKIVVNLTGRLNK--VVSF 243
VDDH++G+I++ GRLNK V+SF
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISF 936
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 32.7 bits (71), Expect = 8.9
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 511 GARYPIRPIVSRIT 552
GARYPIRPIVSRIT
Sbjct: 262 GARYPIRPIVSRIT 275
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,601,738
Number of Sequences: 1657284
Number of extensions: 12721458
Number of successful extensions: 29226
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 28438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29213
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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