Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30783.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 138 6e-32
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 132 6e-30
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 118 7e-26
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 116 2e-25
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 115 5e-25
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 114 1e-24
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 4e-15
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 80 3e-14
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 75 1e-12
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 71 1e-11
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 68 1e-10
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 66 5e-10
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 63 4e-09
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 62 7e-09
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 61 2e-08
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 56 4e-07
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 46 4e-04
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 42 0.010
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.29
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.88
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 1.2
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 1.5
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 2.0
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 33 3.6
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 33 3.6
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 4.7
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 4.7
UniRef50_Q9YBZ9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 32 8.2
UniRef50_A1UFD6 Cluster: Amidohydrolase 2; n=25; Actinomycetales... 32 8.2
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 8.2
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|... 32 8.2
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 138 bits (334), Expect = 6e-32
Identities = 65/69 (94%), Positives = 69/69 (100%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 110 bits (264), Expect = 2e-23
Identities = 49/60 (81%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
KCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 132 bits (318), Expect = 6e-30
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 184 IVVNLTGRL 192
Score = 98.7 bits (235), Expect = 6e-20
Identities = 44/60 (73%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
KCGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRKH GGKILGFFF
Sbjct: 194 KCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 118 bits (284), Expect = 7e-26
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -1
Query: 442 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 263
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 262 RL 257
RL
Sbjct: 234 RL 235
Score = 81.0 bits (191), Expect = 1e-14
Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 96
KCGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 237 KCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 116 bits (280), Expect = 2e-25
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 283 IVVNLTGRL 257
IVV L GRL
Sbjct: 61 IVVELNGRL 69
Score = 103 bits (248), Expect = 2e-21
Identities = 46/60 (76%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
KCGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARRK++GGK+LGFF+
Sbjct: 71 KCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 115 bits (277), Expect = 5e-25
Identities = 60/83 (72%), Positives = 70/83 (84%), Gaps = 4/83 (4%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 283 IVVNLTGRLK--SVVS--FHLVL 227
+VV LT RL V+S FH+ L
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQL 82
Score = 98.7 bits (235), Expect = 6e-20
Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
KCGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRKH GGKILGFFF
Sbjct: 70 KCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 114 bits (274), Expect = 1e-24
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRAGK
Sbjct: 99 MVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRAGK 158
Query: 283 IVVNLTGRL 257
+VVNLTGRL
Sbjct: 159 MVVNLTGRL 167
Score = 96.3 bits (229), Expect = 3e-19
Identities = 42/59 (71%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 81
KCGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+KH GG+ILGFF
Sbjct: 169 KCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 56.8 bits (131), Expect(2) = 4e-15
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = -1
Query: 430 KSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 332
+S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 44 ESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 46.4 bits (105), Expect(2) = 4e-15
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -1
Query: 331 GYIGEFEIVDDHRAGKIVVNLTGRL 257
GYI EFE +DDHRAGKIVV L GR+
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRI 131
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 79.8 bits (188), Expect = 3e-14
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 283 IVVNLTGRL 257
I+V L GR+
Sbjct: 61 IIVQLLGRI 69
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 87
KCG ISPR+ + N + R + LPS++ G ++++T G+M H + R+ +GG LG
Sbjct: 71 KCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLG 130
Query: 86 FFF 78
+ +
Sbjct: 131 YVY 133
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 74.5 bits (175), Expect = 1e-12
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 283 IVVNLTGRL 257
V L GR+
Sbjct: 61 YRVQLLGRI 69
Score = 61.3 bits (142), Expect = 1e-08
Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
K G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K +GG+++ + +
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 70.9 bits (166), Expect = 1e-11
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = -1
Query: 448 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 269
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 268 TGRL 257
GR+
Sbjct: 65 QGRV 68
Score = 68.1 bits (159), Expect = 1e-10
Identities = 29/59 (49%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -3
Query: 251 CGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++++GG++LGFF+
Sbjct: 71 CKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E +++GGKILG+F+
Sbjct: 69 RCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
Score = 61.7 bits (143), Expect = 9e-09
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = -1
Query: 445 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 266
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 265 GRL 257
GRL
Sbjct: 65 GRL 67
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 65.7 bits (153), Expect = 5e-10
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 283 IVVNLTGRL 257
V L GR+
Sbjct: 61 YSVTLVGRI 69
Score = 65.3 bits (152), Expect = 7e-10
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
KCG I PR+ V ERW LP++ FG L+LTTS G+M EAR K +GG++L + +
Sbjct: 71 KCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 62.9 bits (146), Expect = 4e-09
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -3
Query: 251 CGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+ +GGK+L + +
Sbjct: 71 CGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 62.1 bits (144), Expect = 7e-09
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = -1
Query: 454 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 275
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 274 NLTGRL 257
L+G +
Sbjct: 63 ELSGNI 68
Score = 54.4 bits (125), Expect = 1e-06
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -3
Query: 251 CGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
CG I PRF + + E + LP+R FG L+++T+ G+M ++AR++ LGG +L + +
Sbjct: 71 CGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 60.9 bits (141), Expect = 2e-08
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
+CG + PR+ ++ E+W LP+R +G L++TTS G+M H EAR + +GG+++ + +
Sbjct: 88 ECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
Score = 49.2 bits (112), Expect = 5e-05
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = -1
Query: 442 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 263
++AL + NAE G + P S +I L V+ GY+ FE VDD +AGK V L G
Sbjct: 25 TNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKG 84
Query: 262 RL 257
+
Sbjct: 85 AI 86
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 56.0 bits (129), Expect = 4e-07
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
KCG ISPRF V + W LPS G LV+TT+ G+M H EA + +GG ++G+ +
Sbjct: 71 KCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = -1
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 284
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 283 IVVNLTGRL 257
V+L ++
Sbjct: 61 FSVHLLAKI 69
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -3
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+ + +GG ++ + +
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = -1
Query: 451 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 278
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R GKI+
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKII 60
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 41.5 bits (93), Expect = 0.010
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -1
Query: 325 IGEFEIVDDHRAGKIVVNLTGRLKSVVS 242
IG+FE++DDHRAGKIV NL+ ++ V S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 36.7 bits (81), Expect = 0.29
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 233 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
R VP + + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.88
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -1
Query: 451 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 308
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -1
Query: 445 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 314
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 1.5
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -3
Query: 170 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3
Query: 170 GYLVLTTSGGIMDHEEARRKHLGGKIL 90
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 33.1 bits (72), Expect = 3.6
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = -1
Query: 445 LSDALKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIVDDHRAGKIV 278
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 277 VNLTGRLKSVVSFHLVLMFPSTILKDGLIC 188
+ + + L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 460 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 290
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 33.1 bits (72), Expect = 3.6
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 170 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
G ++L+TS G+M +EARR +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 32.7 bits (71), Expect = 4.7
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = -3
Query: 251 CGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 81
C +++P D IN + + +L +GY+V+TT G++DHEE G +LG+F
Sbjct: 140 CNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLLGYF 185
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 4.7
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 170 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 78
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_Q9YBZ9 Cluster: Putative uncharacterized protein; n=1;
Aeropyrum pernix|Rep: Putative uncharacterized protein -
Aeropyrum pernix
Length = 153
Score = 32.3 bits (70), Expect = 6.2
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = -1
Query: 448 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 269
VL D L + + ++R + L K V ++ V + Y+GE I + +I V
Sbjct: 68 VLEDILSKLPSHDRRYLLETLEERVDKNGVLYIRVSKQDAYLGEARIYEGDDVIRIAVGF 127
Query: 268 TGRLKSVVSFHLVLM 224
G + VSF+ L+
Sbjct: 128 QGGRRKAVSFYRELL 142
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 31.9 bits (69), Expect = 8.2
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -1
Query: 355 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRL 257
F+TV MK G+FEIVD+ G+I V+L G L
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSL 32
>UniRef50_A1UFD6 Cluster: Amidohydrolase 2; n=25;
Actinomycetales|Rep: Amidohydrolase 2 - Mycobacterium
sp. (strain KMS)
Length = 409
Score = 31.9 bits (69), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -1
Query: 490 YEARAKS*PMVRMNVLSDALKSIHNAEKRGKRQVLIRP 377
YE R S P++ ++V+ AL+ + +RG + VL+RP
Sbjct: 156 YEGRIFSTPVINLSVVDRALEELEWCLERGAKTVLVRP 193
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 31.9 bits (69), Expect = 8.2
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 170 GYLVLTTSGGIMDHEEARRKHLGGKIL 90
G +++TS GIM EAR++ +GG++L
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
Length = 168
Score = 31.9 bits (69), Expect = 8.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 179 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 84
R G +++T G+M EARR GG+++ F
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAF 166
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,786,791
Number of Sequences: 1657284
Number of extensions: 7583410
Number of successful extensions: 15748
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 15445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15733
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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