Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30780.Seq
(548 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 25 0.33
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.1
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 21 5.4
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 21 7.1
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 21 9.4
EF222289-1|ABN79649.1| 68|Tribolium castaneum adipokinetic hor... 21 9.4
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 9.4
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 9.4
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 25.4 bits (53), Expect = 0.33
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 3 LIYFILVILL-LEYFVFLKHTFNITLLINHCILF 101
L Y +L+ILL + YF + F + LL+ CI +
Sbjct: 227 LFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYY 260
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 9 YFILVILLLEYFVFLKHTFNITLLINHCILFSLV 110
Y +++L + YF + F + LL CI + +V
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 6 IYFILVILLLEYFVFLKHTFNITLLINHCILFSLVCNQFDLSLASSRL 149
++F +IL++++ L H F I +L C + L+ + L
Sbjct: 1331 VFFFALILVIQFVAMLFHRFGTIAHILASTELNLCCTKKKEELSPNAL 1378
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 6 IYFILVILLLEYFVFLKHTFNITLLINHCILFSLVCNQFDLSLASSRL 149
++F +IL++++ L H F I +L C + L+ + L
Sbjct: 1331 VFFFALILVIQFVAMLFHRFGTIAHILASTELNLCCTKKKEELSPNAL 1378
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 6 IYFILVILLLEYFVFLKHTFNITLLINHCILFSLVCNQFDLSLASSRL 149
++F +IL++++ L H F I +L C + L+ + L
Sbjct: 1331 VFFFALILVIQFVAMLFHRFGTIAHILASTELNLCCTKKKEELSPNAL 1378
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 6 IYFILVILLLEYFVFLKHTFNITLLINHCILFSLVCNQFDLSLASSRL 149
++F +IL++++ L H F I +L C + L+ + L
Sbjct: 1331 VFFFALILVIQFVAMLFHRFGTIAHILASTELNLCCTKKKEELSPNAL 1378
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 21.4 bits (43), Expect = 5.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 482 PKWKERTPFMGELWE 526
P KE+TPF+ W+
Sbjct: 476 PNPKEKTPFINVTWK 490
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.0 bits (42), Expect = 7.1
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 6 IYFILVILLLE---YFVFLKHTFNITLLINHCILFSLVCNQFDLSLASSRLTTGPYNPTN 176
++ + +IL+ E Y + ++ +NI + + N +L SS+ TG +
Sbjct: 308 VFILWIILVPEEQVYHLEIEKYYNILYFCRIMVYLNSAINPILYNLMSSKFRTGFIICSE 367
Query: 177 LHRKKY 194
+RK Y
Sbjct: 368 SNRKFY 373
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 12 FILVILLLEYFVFLKH 59
+I LLL Y+++ KH
Sbjct: 5 YIACFLLLLYYIYSKH 20
>EF222289-1|ABN79649.1| 68|Tribolium castaneum adipokinetic
hormone 2 protein.
Length = 68
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 461 ADQLDWIPKWKERTP 505
A QL++ P W +R P
Sbjct: 18 AAQLNFTPNWGKRAP 32
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 438 KFPCPKKMQINLTGFLNGKNAR 503
K+P M+ L G GKNA+
Sbjct: 444 KYPLIGAMREELRGISRGKNAK 465
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 437 FFKLVGDIFNDNIIFHV 387
FFKL+GD+ D + +
Sbjct: 384 FFKLIGDVPIDTFLMEM 400
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,649
Number of Sequences: 336
Number of extensions: 2673
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -