Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30780.Seq
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...   108   3e-24
Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    34   0.077
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    34   0.077
Z75551-3|CAA99936.2|  547|Caenorhabditis elegans Hypothetical pr...    34   0.077
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla...    29   2.2  
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ...    29   2.2  
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       29   2.9  
AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z34801-7|CAJ76938.1|   85|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z34801-6|CAA84329.1|  428|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score =  108 bits (259), Expect = 3e-24
 Identities = 46/83 (55%), Positives = 66/83 (79%)
 Frame = +3

Query: 255 FSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 434
           FSDKEKKL+K MKF   L Q++D+++  +DV+KPWIT ++ +IL MEDDVV+EY+ +Q++
Sbjct: 17  FSDKEKKLLKTMKFEPQLEQKIDLNRCNMDVIKPWITARVNDILGMEDDVVVEYILSQID 76

Query: 435 EKFPCPKKMQINLTGFLNGKNAR 503
           +K   PK +QIN+TGFLN + AR
Sbjct: 77  DKNLNPKLLQINVTGFLNARRAR 99


>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 33.9 bits (74), Expect = 0.077
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +3

Query: 342 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEK 440
           D ++PW+ +K+T+ L  ED    +++ +Q+E++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQ 664


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 33.9 bits (74), Expect = 0.077
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +3

Query: 342 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEK 440
           D ++PW+ +K+T+ L  ED    +++ +Q+E++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQ 664


>Z75551-3|CAA99936.2|  547|Caenorhabditis elegans Hypothetical
           protein W04D2.6b protein.
          Length = 547

 Score = 33.9 bits (74), Expect = 0.077
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +3

Query: 342 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEK 440
           D ++PW+ +K+T+ L  ED    +++ +Q+E++
Sbjct: 474 DRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQ 506


>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
            protein 8 protein.
          Length = 1206

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 345  VLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA 500
            V+KP I Q   ++LNM+   +I+   N   E  P  +++++N+  +LN K +
Sbjct: 867  VVKPTIPQN--KVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGS 916


>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1152

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 345 VLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA 500
           V+KP I Q   ++LNM+   +I+   N   E  P  +++++N+  +LN K +
Sbjct: 813 VVKPTIPQN--KVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGS 862


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 324 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 434
           +S +K DVL P I  +   I+N+E DV +E +T   E
Sbjct: 138 VSYIKRDVLFPQIMPRDMIIVNVEIDVAVETITTTNE 174


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 324 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 434
           +S +K DVL P I  +   I+N+E DV +E +T   E
Sbjct: 138 VSYIKRDVLFPQIMPRDMIIVNVEIDVAVETITTTNE 174


>AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical
           protein E03H12.3 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 426 QLEEKFPCPKKMQINLTGFLNGKN 497
           +++ +F CPK M IN   + NG N
Sbjct: 121 KVDSQFQCPKNMTINQYNYTNGFN 144


>Z34801-7|CAJ76938.1|   85|Caenorhabditis elegans Hypothetical
           protein F59A2.4b protein.
          Length = 85

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = +3

Query: 267 EKKLMKQMKFGDCLTQQVDMSKVKLDVLKP--WITQKI---TEILNMEDDV 404
           ++ ++K   FG CL  +VD+ K  + +L P   I  K+   ++I +++D +
Sbjct: 33  DENVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPSKVLVFSDITHLDDQI 83


>Z34801-6|CAA84329.1|  428|Caenorhabditis elegans Hypothetical
           protein F59A2.4a protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = +3

Query: 267 EKKLMKQMKFGDCLTQQVDMSKVKLDVLKP--WITQKI---TEILNMEDDV 404
           ++ ++K   FG CL  +VD+ K  + +L P   I  K+   ++I +++D +
Sbjct: 376 DENVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPSKVLVFSDITHLDDQI 426


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,303,688
Number of Sequences: 27780
Number of extensions: 249334
Number of successful extensions: 692
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)