Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30774.Seq
(479 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 124 8e-28
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 118 7e-26
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 107 1e-22
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 107 2e-22
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 104 9e-22
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 104 1e-21
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 75 8e-13
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 9e-13
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 73 3e-12
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 72 8e-12
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 71 2e-11
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 69 5e-11
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 66 5e-10
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 65 7e-10
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 60 3e-08
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 57 2e-07
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 47 2e-04
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 38 0.12
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.82
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 35 1.1
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 1.1
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 34 1.4
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 1.9
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 34 1.9
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 1.9
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 3.3
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 32 5.8
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 124 bits (300), Expect = 8e-28
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 249 IV 254
IV
Sbjct: 61 IV 62
Score = 117 bits (281), Expect = 2e-25
Identities = 53/67 (79%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 NLTGRLNKCGVISPRFDVPINXIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 433
NLTGRLNKCGVISPRFDV + +E+W NLLPSRQFG++VLTTS GIMDHEEARRKH GG
Sbjct: 64 NLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGG 123
Query: 434 KILGLLF 454
KILG F
Sbjct: 124 KILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 118 bits (284), Expect = 7e-26
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 249 IV 254
IV
Sbjct: 184 IV 185
Score = 105 bits (252), Expect = 5e-22
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 NLTGRLNKCGVISPRFDVPINXIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 433
NLTGRLNKCGVIS RFDV + +++W NLLP RQFG++VLTT GI+DHEEARRKH GG
Sbjct: 187 NLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGG 246
Query: 434 KILGLLF 454
KILG F
Sbjct: 247 KILGFFF 253
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 107 bits (258), Expect = 1e-22
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
L GRLNKCGVISPRFDV + IE WT LLPSRQFG++VLTTS GIMDHEEARRK++GGK
Sbjct: 65 LNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGK 124
Query: 437 ILGLLF 454
+LG +
Sbjct: 125 VLGFFY 130
Score = 107 bits (257), Expect = 1e-22
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 249 IV 254
IV
Sbjct: 61 IV 62
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 107 bits (256), Expect = 2e-22
Identities = 50/62 (80%), Positives = 58/62 (93%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 249 IV 254
+V
Sbjct: 60 MV 61
Score = 100 bits (239), Expect = 2e-20
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
LT RLNKCGVISPRF V + +E+W NLLPS QFG+++LTTS GI D EEARRKH GGK
Sbjct: 64 LTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGK 123
Query: 437 ILGLLF 454
ILG F
Sbjct: 124 ILGFFF 129
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 104 bits (250), Expect = 9e-22
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = +3
Query: 90 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 254
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIV
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIV 228
Score = 92.7 bits (220), Expect = 4e-18
Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 NLTGRLNKCGVISPRFDVPINXIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 433
NLTGRLNKCGVI+ RFDV +E+W NL PS QFG++VLTTS GIMDHEEAR+KH G
Sbjct: 230 NLTGRLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGS 289
Query: 434 K 436
+
Sbjct: 290 R 290
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 104 bits (249), Expect = 1e-21
Identities = 49/69 (71%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 NLTGRLNKCGVISPRFDVPINXIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 433
NLTGRLNKCGVISPRFDV + +E+W NLLP+RQFG++VLTT GIMD EE R+KH GG
Sbjct: 162 NLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTGG 221
Query: 434 KILGLLFLS 460
+ILG FLS
Sbjct: 222 EILG-FFLS 229
Score = 101 bits (241), Expect = 1e-20
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 242
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 243 GKIV 254
GK+V
Sbjct: 157 GKMV 160
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 74.9 bits (176), Expect = 8e-13
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +2
Query: 236 QSWQDCXNLTGRLNKCGVISPRFDVPINXIERW-TNLLPSRQFGYLVLTTSGGIMDHEEA 412
+S + +L GRLN+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E
Sbjct: 55 RSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKEC 114
Query: 413 RRKHLGGKILGLLF 454
+++GGKILG +
Sbjct: 115 LTENVGGKILGYFY 128
Score = 52.4 bits (120), Expect = 5e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 254
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSI 60
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 9e-13
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 200
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 37.9 bits (84), Expect(2) = 9e-13
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 201 GYIGEFEIVDDHRAGKIV 254
GYI EFE +DDHRAGKIV
Sbjct: 107 GYINEFEFIDDHRAGKIV 124
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 73.3 bits (172), Expect = 3e-12
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
L GR+NKCG I PR+ V ERW LP++ FG L+LTTS G+M EAR K +GG+
Sbjct: 65 LVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQ 124
Query: 437 ILGLLF 454
+L ++
Sbjct: 125 LLAYVY 130
Score = 59.7 bits (138), Expect = 3e-08
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAG 245
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAG 59
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 71.7 bits (168), Expect = 8e-12
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 249 IV 254
I+
Sbjct: 61 II 62
Score = 58.0 bits (134), Expect = 1e-07
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARRKHL 427
L GR+NKCG ISPR+ + N + R + LPS++ G ++++T G+M H + R+ +
Sbjct: 65 LLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKI 124
Query: 428 GGKILGLLF 454
GG LG ++
Sbjct: 125 GGVTLGYVY 133
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 70.5 bits (165), Expect = 2e-11
Identities = 31/67 (46%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 NLTGRLNKCGVISPRFDVPINXIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 433
+L GR+N C ++ R DV IE++T LP+RQ+GY+V+TT GI+DHEEA ++++GG
Sbjct: 63 DLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGG 122
Query: 434 KILGLLF 454
++LG +
Sbjct: 123 QVLGFFY 129
Score = 62.9 bits (146), Expect = 4e-09
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = +3
Query: 84 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 251
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 68.9 bits (161), Expect = 5e-11
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAG 245
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAG 59
Score = 68.1 bits (159), Expect = 1e-10
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
L GR+NK G I PRF V ++ E+W LP+ +FG L+++TS G+M H+EA K +GG+
Sbjct: 65 LLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGR 124
Query: 437 ILGLLF 454
++ ++
Sbjct: 125 LIAYVY 130
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 65.7 bits (153), Expect = 5e-10
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
L+ +N CGVI PR V + IER+ + LP++ FG ++LTT+ GIM H EAR+ +GGK
Sbjct: 64 LSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGK 123
Query: 437 ILGLLF 454
+L ++
Sbjct: 124 LLAYVY 129
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 65.3 bits (152), Expect = 7e-10
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
L G +N+CG + PR+ + E+W LP+R +G L++TTS G+M H EAR + +GG+
Sbjct: 82 LKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQ 141
Query: 437 ILGLLF 454
++ ++
Sbjct: 142 VIAYVY 147
Score = 45.6 bits (103), Expect = 6e-04
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 242
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 243 GK 248
GK
Sbjct: 76 GK 77
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 59.7 bits (138), Expect = 3e-08
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
L+G +N CG I PRF + E + LP+R FG L+++T+ G+M ++AR++ LGG
Sbjct: 64 LSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGV 123
Query: 437 ILGLLF 454
+L ++
Sbjct: 124 LLAYVY 129
Score = 55.2 bits (127), Expect = 7e-07
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +3
Query: 78 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 254
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFI 61
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 NLTGRLNKCGVISPRFDVPINXIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 433
+L ++ KCG ISPRF V W LPS G LV+TT+ G+M H EA + +GG
Sbjct: 64 HLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGG 123
Query: 434 KILGLLF 454
++G ++
Sbjct: 124 FLIGYVY 130
Score = 50.0 bits (114), Expect = 3e-05
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINXIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
L+ N+ I PRF V + +E++ LP+ FG L+L+TS G++ + EA+ + +GG
Sbjct: 64 LSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGV 123
Query: 437 ILGLLF 454
++ ++
Sbjct: 124 LIAYVY 129
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +3
Query: 81 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV*I 260
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R GKI+ I
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKIIEI 62
Query: 261 SQAD 272
++
Sbjct: 63 ELSE 66
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 37.9 bits (84), Expect = 0.12
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 299 RFDVPINXIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGLLF 454
R VP + + R LP + G +L+T G+M EAR+K LGG+++G +F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.82
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 81 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 224
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 34.7 bits (76), Expect = 1.1
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 207 IGEFEIVDDHRAGKIV 254
IG+FE++DDHRAGKIV
Sbjct: 9 IGKFEVIDDHRAGKIV 24
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 218
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 34.3 bits (75), Expect = 1.4
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGLLF 454
G ++L+TS G+M +EARR +GG++L +F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 1.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKIL 442
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 33.9 bits (74), Expect = 1.9
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGLLF 454
G +++TS GIM EAR++ +GG++L L++
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVLCLVY 136
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 33.9 bits (74), Expect = 1.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKIL 442
G ++L+TS GIM EAR K +GG+IL
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEIL 130
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3
Query: 144 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 28
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 33.1 bits (72), Expect = 3.3
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 263 TGRLNKCGVISPRFDVPINXIERWTNLLPSRQFGYLVLTTSGGIMDHEE 409
T ++ C +++P D IN + + +L +GY+V+TT G++DHEE
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE 178
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 3.3
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 72 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 242
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.3 bits (70), Expect = 5.8
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKIL 442
G +++TS GIM EARR+ +GG+IL
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEIL 129
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,537,114
Number of Sequences: 1657284
Number of extensions: 7072409
Number of successful extensions: 14541
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14525
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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