Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30774.Seq
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   3.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   4.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   5.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.8  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +2

Query: 236 QSWQDCXNLTGRLNKCGVISPR-FDVP 313
           Q WQ+       LNKC V  PR +D P
Sbjct: 125 QGWQNSIRHNLSLNKCFVKVPRHYDDP 151


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 340 SAPLTTVWLPSPYNKW 387
           SA + TVW+ S  N+W
Sbjct: 448 SAYVATVWINSVINRW 463


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 456 RKRSPKIFPPRC 421
           R  SP+ +PPRC
Sbjct: 22  RPHSPEPYPPRC 33


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 447 SPKIFPPRCFLLASSWSMMPP 385
           S K+ PP+     +SWS   P
Sbjct: 516 SKKVRPPQVLCYITSWSQKRP 536


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 2   FFFFFWTVLSIR 37
           +FF FWT+L  R
Sbjct: 67  YFFNFWTILFSR 78


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 290 ISPRFDVPINXIERWTN 340
           + P FD P +  E W N
Sbjct: 293 VIPEFDAPAHVGEGWQN 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,177
Number of Sequences: 336
Number of extensions: 1738
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)