Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30769.Seq
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.45 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    25   0.78 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   1.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   7.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 691 PXRPTGSSTESVXGGFPGGVVNAV 620
           P + TG + E    GFPGG+  AV
Sbjct: 444 PPKHTGKNCEIYDRGFPGGLGRAV 467


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +1

Query: 307 WDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISA 429
           W K L   Q++ +E FK+  LPL  +K+  K++ +V++  A
Sbjct: 15  WGKSLSIPQQILNE-FKSTLLPLFGLKEQPKIEGKVQVPEA 54


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 530 AQRHSDSXIEIGSVRFPDRHSAAGMKSSRRNRVNDAAR 643
           A+ ++ + + I S+   D H+  G K++  + VNDA +
Sbjct: 338 AKDNNLAGVMIWSIETDDLHATCGTKNALLHAVNDAMK 375


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 372 VGSHQEDHETRRGGEDDISRGTGLIREGC*DFYTRANVASL 494
           +G + +D    RGG  D  RG G   E   +FY    V ++
Sbjct: 84  LGENNDDSGGGRGGGRDGDRGDGGGEEKKREFYIPPEVENV 124


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -3

Query: 503 VCDQARNVSSCIKI 462
           +CD+A   S+C+++
Sbjct: 335 ICDEAHYASNCLRV 348


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 160 KLVEKTTKCPCASLCLP 210
           K ++ TTK P   +C P
Sbjct: 113 KFIKVTTKAPLECMCRP 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,585
Number of Sequences: 336
Number of extensions: 3033
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)