Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30769.Seq
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78774-1|AAC51669.1| 335|Homo sapiens NFY-C protein. 119 9e-27
U62296-1|AAC50816.1| 335|Homo sapiens transcription factor NF-Y... 119 9e-27
D85425-1|BAA12818.1| 335|Homo sapiens transactivator HSM-1 prot... 119 9e-27
BT020081-1|AAV38884.1| 335|Homo sapiens nuclear transcription f... 119 9e-27
BC005003-1|AAH05003.1| 335|Homo sapiens nuclear transcription f... 119 9e-27
AL354914-7|CAI16536.1| 313|Homo sapiens nuclear transcription f... 119 9e-27
AL354914-6|CAI16535.1| 254|Homo sapiens nuclear transcription f... 119 9e-27
AL354914-4|CAI16530.1| 439|Homo sapiens nuclear transcription f... 119 9e-27
AL354914-3|CAI16533.1| 458|Homo sapiens nuclear transcription f... 119 9e-27
AL354914-2|CAI16532.1| 301|Homo sapiens nuclear transcription f... 119 9e-27
AL354914-1|CAI16531.1| 335|Homo sapiens nuclear transcription f... 119 9e-27
AK000346-1|BAA91100.1| 439|Homo sapiens protein ( Homo sapiens ... 119 9e-27
AF191744-1|AAG28389.1| 458|Homo sapiens NFY-C variant DS2.8 pro... 119 9e-27
AB208975-1|BAD92212.1| 378|Homo sapiens nuclear transcription f... 119 9e-27
D89986-1|BAA14051.1| 335|Homo sapiens HSM-2 protein. 118 2e-26
Z74792-1|CAA99055.1| 335|Homo sapiens CCAAT transcription bindi... 118 3e-26
AL354914-5|CAI16534.1| 129|Homo sapiens nuclear transcription f... 118 3e-26
X96506-1|CAA65358.1| 205|Homo sapiens NC2 protein. 45 2e-04
BC010025-1|AAH10025.1| 205|Homo sapiens DR1-associated protein ... 45 2e-04
BC015891-1|AAH15891.1| 131|Homo sapiens chromatin accessibility... 43 0.001
AK023537-1|BAB14601.1| 131|Homo sapiens protein ( Homo sapiens ... 43 0.001
AF226076-1|AAF72416.1| 131|Homo sapiens CHRAC15 protein. 43 0.001
U41843-1|AAB02192.1| 193|Homo sapiens Dr1-associated corepresso... 42 0.002
AL354914-8|CAI16537.1| 256|Homo sapiens nuclear transcription f... 41 0.004
BC031331-1|AAH31331.1| 117|Homo sapiens polymerase (DNA-directe... 40 0.008
AF261688-1|AAF90132.1| 117|Homo sapiens DNA polymerase epsilon ... 40 0.008
AC007400-1|AAY15030.1| 117|Homo sapiens unknown protein. 40 0.008
>U78774-1|AAC51669.1| 335|Homo sapiens NFY-C protein.
Length = 335
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>U62296-1|AAC50816.1| 335|Homo sapiens transcription factor NF-YC
subunit protein.
Length = 335
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>D85425-1|BAA12818.1| 335|Homo sapiens transactivator HSM-1
protein.
Length = 335
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>BT020081-1|AAV38884.1| 335|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 335
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>BC005003-1|AAH05003.1| 335|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 335
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AL354914-7|CAI16536.1| 313|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 313
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AL354914-6|CAI16535.1| 254|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 254
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AL354914-4|CAI16530.1| 439|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 439
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AL354914-3|CAI16533.1| 458|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 458
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AL354914-2|CAI16532.1| 301|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 301
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AL354914-1|CAI16531.1| 335|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 335
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AK000346-1|BAA91100.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ20339 fis, clone HEP12350. ).
Length = 439
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AF191744-1|AAG28389.1| 458|Homo sapiens NFY-C variant DS2.8
protein.
Length = 458
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AB208975-1|BAD92212.1| 378|Homo sapiens nuclear transcription
factor Y, gamma variant protein.
Length = 378
Score = 119 bits (287), Expect = 9e-27
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 61 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 120
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 121 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 180
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 181 TPAEPVQYYFTL 192
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 120 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 164
>D89986-1|BAA14051.1| 335|Homo sapiens HSM-2 protein.
Length = 335
Score = 118 bits (285), Expect = 2e-26
Identities = 66/132 (50%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE K E+KP K Q
Sbjct: 77 ITELTLRAWIHTENNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTENNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>Z74792-1|CAA99055.1| 335|Homo sapiens CCAAT transcription binding
factor, gamma subunit protein.
Length = 335
Score = 118 bits (283), Expect = 3e-26
Identities = 65/132 (49%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKI+KLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIIKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIKGGLCSATT*RQXY*NRXXXXXXXT*CRGHEVKPTKPXXXXXQE- 645
I ELTLRAW HTE+ K E+KP K Q
Sbjct: 77 ITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSV 136
Query: 646 SPQXRIQYYFQL 681
+P +QYYF L
Sbjct: 137 TPAEPVQYYFTL 148
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>AL354914-5|CAI16534.1| 129|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 129
Score = 118 bits (283), Expect = 3e-26
Identities = 55/76 (72%), Positives = 66/76 (86%)
Frame = +1
Query: 289 QTLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
Q+LQ FW +V+E+I+ + +DF+ Q LPLARIKKIMKLDE+VKMISAEAPVLFAKAA+IF
Sbjct: 17 QSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIF 76
Query: 469 IHELTLRAWSHTEEIK 516
I ELTLRAW HTE+ K
Sbjct: 77 ITELTLRAWIHTEDNK 92
Score = 58.8 bits (136), Expect = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 465 FYTRANVASLVAYGGNKRRTLQRNDIATAILKSDQFDFLIDIVPR 599
F T + + + NKRRTLQRNDIA AI K DQFDFLIDIVPR
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
>X96506-1|CAA65358.1| 205|Homo sapiens NC2 protein.
Length = 205
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +1
Query: 370 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTE 507
P ARIKKIM+ DEE+ ++A PV+ ++A E+F+ L +A T+
Sbjct: 13 PPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQ 58
>BC010025-1|AAH10025.1| 205|Homo sapiens DR1-associated protein 1
(negative cofactor 2 alpha) protein.
Length = 205
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +1
Query: 370 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTE 507
P ARIKKIM+ DEE+ ++A PV+ ++A E+F+ L +A T+
Sbjct: 13 PPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQ 58
>BC015891-1|AAH15891.1| 131|Homo sapiens chromatin accessibility
complex 1 protein.
Length = 131
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 364 ALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSH 501
+LPL+RI+ IMK EV I+ EA VL AKA E+F+ L ++ H
Sbjct: 18 SLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRH 63
>AK023537-1|BAB14601.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ13475 fis, clone PLACE1003605. ).
Length = 131
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 364 ALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSH 501
+LPL+RI+ IMK EV I+ EA VL AKA E+F+ L ++ H
Sbjct: 18 SLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRH 63
>AF226076-1|AAF72416.1| 131|Homo sapiens CHRAC15 protein.
Length = 131
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 364 ALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSH 501
+LPL+RI+ IMK EV I+ EA VL AKA E+F+ L ++ H
Sbjct: 18 SLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRH 63
>U41843-1|AAB02192.1| 193|Homo sapiens Dr1-associated corepressor
protein.
Length = 193
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 379 RIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTE 507
RIKKIM+ DEE+ ++A PV+ ++A E+F+ L +A T+
Sbjct: 4 RIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQ 46
>AL354914-8|CAI16537.1| 256|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 256
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3
Query: 534 NDIATAILKSDQFDFLIDIVPR 599
NDIA AI K DQFDFLIDIVPR
Sbjct: 1 NDIAMAITKFDQFDFLIDIVPR 22
>BC031331-1|AAH31331.1| 117|Homo sapiens polymerase (DNA-directed),
epsilon 4 (p12 subunit) protein.
Length = 117
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 367 LPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEEIK 516
LPLAR+K ++K D +V + EA + A+AAE+F+ + A+ ++ K
Sbjct: 41 LPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGK 90
>AF261688-1|AAF90132.1| 117|Homo sapiens DNA polymerase epsilon p12
subunit protein.
Length = 117
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 367 LPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEEIK 516
LPLAR+K ++K D +V + EA + A+AAE+F+ + A+ ++ K
Sbjct: 41 LPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGK 90
>AC007400-1|AAY15030.1| 117|Homo sapiens unknown protein.
Length = 117
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 367 LPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEEIK 516
LPLAR+K ++K D +V + EA + A+AAE+F+ + A+ ++ K
Sbjct: 41 LPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGK 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,817,938
Number of Sequences: 237096
Number of extensions: 1854112
Number of successful extensions: 4176
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4176
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -