Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30759.Seq
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 116 4e-25
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 109 5e-23
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 107 2e-22
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 101 7e-21
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 99 6e-20
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 93 3e-18
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 72 8e-12
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 71 1e-11
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 71 1e-11
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 67 2e-10
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 67 2e-10
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 67 2e-10
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 66 6e-10
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 54 2e-09
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 60 4e-08
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 58 1e-07
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 48 9e-05
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 38 0.17
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.90
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 1.2
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 34 1.6
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 2.1
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 34 2.1
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 2.7
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|... 33 4.8
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 6.3
UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165; Bacter... 32 6.3
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 116 bits (278), Expect = 4e-25
Identities = 52/68 (76%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+NL G LNKCGV SPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH G
Sbjct: 63 VNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTG 122
Query: 431 GKILGFLF 454
GKILGF F
Sbjct: 123 GKILGFFF 130
Score = 113 bits (271), Expect = 3e-24
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGX 248
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMK GYIGEFEI+DD R G
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 249 IV 254
IV
Sbjct: 61 IV 62
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 109 bits (261), Expect = 5e-23
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGX 248
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMK GY GEFEI+DD R G
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 249 IV 254
IV
Sbjct: 184 IV 185
Score = 104 bits (249), Expect = 1e-21
Identities = 47/68 (69%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+NL G LNKCGV S RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRKH G
Sbjct: 186 VNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTG 245
Query: 431 GKILGFLF 454
GKILGF F
Sbjct: 246 GKILGFFF 253
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 107 bits (256), Expect = 2e-22
Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L G LNKCGV SPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARRK++G
Sbjct: 63 VELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVG 122
Query: 431 GKILGFLF 454
GK+LGF +
Sbjct: 123 GKVLGFFY 130
Score = 97.1 bits (231), Expect = 2e-19
Identities = 46/62 (74%), Positives = 53/62 (85%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGX 248
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM K GYIGEFE VDD R G
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 249 IV 254
IV
Sbjct: 61 IV 62
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 101 bits (243), Expect = 7e-21
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+NL G LNKCGV SPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+KH G
Sbjct: 161 VNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTG 220
Query: 431 GKILGF 448
G+ILGF
Sbjct: 221 GEILGF 226
Score = 89.4 bits (212), Expect = 4e-17
Identities = 44/64 (68%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRX 242
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMK GYI EFEI+DD R
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 243 GXIV 254
G +V
Sbjct: 157 GKMV 160
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 98.7 bits (235), Expect = 6e-20
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LXGXLNKCGVXSPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
L LNKCGV SPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRKH GGK
Sbjct: 64 LTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGK 123
Query: 437 ILGFLF 454
ILGF F
Sbjct: 124 ILGFFF 129
Score = 95.5 bits (227), Expect = 6e-19
Identities = 46/62 (74%), Positives = 54/62 (87%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGX 248
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MK GYIGEFEI DD R G
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 249 IV 254
+V
Sbjct: 60 MV 61
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 93.1 bits (221), Expect = 3e-18
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +3
Query: 90 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGXIV 254
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMK GYIGEFEI+DD G IV
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIV 228
Score = 89.0 bits (211), Expect = 5e-17
Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+NL G LNKCGV + RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+KH G
Sbjct: 229 VNLTGRLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTG 288
Query: 431 GK 436
+
Sbjct: 289 SR 290
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 71.7 bits (168), Expect = 8e-12
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
++L G LN+CG SP + V + IE + T LLP+RQFG+++ TS GI+DH+E +++G
Sbjct: 61 IDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVG 120
Query: 431 GKILGFLF 454
GKILG+ +
Sbjct: 121 GKILGYFY 128
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXG 245
L++ K+I+NA + GKRQ+L+R ++ + FL M++ GYI F + D R G
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSG 57
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 70.9 bits (166), Expect = 1e-11
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L G +NKCG PR+ V ERW LP++ FG L+LTTS G+M EAR K +G
Sbjct: 63 VTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIG 122
Query: 431 GKILGFLF 454
G++L +++
Sbjct: 123 GQLLAYVY 130
Score = 58.8 bits (136), Expect = 6e-08
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXG 245
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD + G
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAG 59
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 70.9 bits (166), Expect = 1e-11
Identities = 31/68 (45%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
++L G +N C + R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++++G
Sbjct: 62 VDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVG 121
Query: 431 GKILGFLF 454
G++LGF +
Sbjct: 122 GQVLGFFY 129
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3
Query: 84 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGXI 251
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D R G I
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 67.3 bits (157), Expect = 2e-10
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGX 248
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD R G
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 249 IV 254
I+
Sbjct: 61 II 62
Score = 55.6 bits (128), Expect = 6e-07
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARRK 421
+ L G +NKCG SPR+ + N + R + LPS++ G ++++T G+M H + R+
Sbjct: 63 VQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIRE 122
Query: 422 HLGGKILGFLF 454
+GG LG+++
Sbjct: 123 KIGGVTLGYVY 133
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 66.9 bits (156), Expect = 2e-10
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L G +N+CG PR+ ++ E+W LP+R +G L++TTS G+M H EAR + +G
Sbjct: 80 VELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIG 139
Query: 431 GKILGFLF 454
G+++ +++
Sbjct: 140 GQVIAYVY 147
Score = 41.5 bits (93), Expect = 0.010
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRX 242
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 243 G 245
G
Sbjct: 76 G 76
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 66.9 bits (156), Expect = 2e-10
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L G +NK G PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K +G
Sbjct: 63 VQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIG 122
Query: 431 GKILGFLF 454
G+++ +++
Sbjct: 123 GRLIAYVY 130
Score = 66.1 bits (154), Expect = 4e-10
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXG 245
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K GYIGEFE +DD R G
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAG 59
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 65.7 bits (153), Expect = 6e-10
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L +N CGV PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+ +G
Sbjct: 62 VELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIG 121
Query: 431 GKILGFLF 454
GK+L +++
Sbjct: 122 GKLLAYVY 129
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 54.0 bits (124), Expect(2) = 2e-09
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMK 197
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM K
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQK 75
Score = 29.9 bits (64), Expect(2) = 2e-09
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 201 GYIGEFEIVDDXRXGXIV 254
GYI EFE +DD R G IV
Sbjct: 107 GYINEFEFIDDHRAGKIV 124
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 59.7 bits (138), Expect = 4e-08
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L G +N CG PRF + + E + LP+R FG L+++T+ G+M ++AR++ LG
Sbjct: 62 VELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLG 121
Query: 431 GKILGFLF 454
G +L +++
Sbjct: 122 GVLLAYVY 129
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +3
Query: 78 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGXIV 254
++ LS+A+ +I NAE G+++ I+P SK+I L VM GYI FE V++ R G +
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFI 61
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 233 SQXWQXCLNLXGXLNKCGVXSPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEE 409
S+ + ++L + KCG SPRF V + W LPS G LV+TT+ G+M H E
Sbjct: 56 SRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHE 115
Query: 410 ARRKHLGGKILGFLF 454
A + +GG ++G+++
Sbjct: 116 AAERGIGGFLIGYVY 130
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXG 245
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R G
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGG 59
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 48.4 bits (110), Expect = 9e-05
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLXGXLNKCGVXSPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L N+ PRF V +++E++ LP+ FG L+L+TS G++ + EA+ + +G
Sbjct: 62 IELSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIG 121
Query: 431 GKILGFLF 454
G ++ +++
Sbjct: 122 GVLIAYVY 129
Score = 41.1 bits (92), Expect = 0.014
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +3
Query: 81 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEIVDDXRXGXIV*I 260
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R G I+ I
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKIIEI 62
Query: 261 SQAD 272
++
Sbjct: 63 ELSE 66
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 37.5 bits (83), Expect = 0.17
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 299 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFLF 454
R VP + + R LP + G +L+T G+M EAR+K LGG+++G +F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 35.1 bits (77), Expect = 0.90
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGFLF 454
G ++L+TS GIM EAR K +GG+IL +++
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 81 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEFEI 224
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKXGYIGEF 218
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 2.1
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKIL 442
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 33.9 bits (74), Expect = 2.1
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGFLF 454
G ++L+TS G+M +EARR +GG++L +F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 33.5 bits (73), Expect = 2.7
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGFLF 454
G +++TS GIM EARR+ +GG+IL +++
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 3.6
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -1
Query: 144 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 28
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
Length = 168
Score = 32.7 bits (71), Expect = 4.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 353 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGFLF 454
R G +++T G+M EARR GG+++ F++
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAFVW 168
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 32.3 bits (70), Expect = 6.3
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGFLF 454
G +++TS GIM EAR++ +GG++L ++
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVLCLVY 136
>UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165;
Bacteria|Rep: 30S ribosomal protein S8 - Gloeobacter
violaceus
Length = 133
Score = 32.3 bits (70), Expect = 6.3
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGFLF 454
G +++TS G+M +ARR +GG++L ++F
Sbjct: 103 GIAIISTSQGVMTDRDARRAGVGGEVLCYVF 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,763,615
Number of Sequences: 1657284
Number of extensions: 6835586
Number of successful extensions: 13337
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 13073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13322
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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