Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30756.Seq
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.6  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   8.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 5/17 (29%), Positives = 13/17 (76%)
 Frame = -2

Query: 531 FFIVHHPIYRNDNTTPR 481
           +++ HH +++ D+TT +
Sbjct: 728 YYMPHHAVFKQDSTTTK 744


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 260 IRQAISK---ALIAFYQKYVDEASKKEIK 337
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 260 IRQAISK---ALIAFYQKYVDEASKKEIK 337
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 260 IRQAISK---ALIAFYQKYVDEASKKEIK 337
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 260 IRQAISK---ALIAFYQKYVDEASKKEIK 337
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,752
Number of Sequences: 2352
Number of extensions: 11977
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)