Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30755.Seq
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0999 - 25134828-25135113,25135479-25135535,25136171-251362... 34 0.10
03_05_1079 + 30222017-30222903,30222992-30223117,30223752-302238... 34 0.14
01_06_0560 + 30244814-30244871,30244979-30245140,30245725-302457... 32 0.42
07_03_0265 + 15976331-15976645,15977575-15977784,15977869-159779... 32 0.56
04_04_1475 + 33856351-33856582,33857614-33857781,33858156-338582... 32 0.56
05_05_0087 - 22291732-22292029,22292967-22293034,22293640-222937... 31 0.74
02_04_0474 - 23202739-23203011,23203103-23203469,23203592-232039... 31 0.74
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 31 0.74
08_02_0755 - 20814074-20814268,20814909-20814965,20815047-208151... 31 0.97
01_06_1331 + 36373059-36373338,36374190-36374263,36374530-363746... 31 1.3
05_01_0048 + 331155-333077,333208-333354,333540-334087,334481-33... 30 1.7
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 30 2.2
09_06_0274 + 21967740-21968230,21968411-21968550,21968711-219689... 29 3.0
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 29 3.0
02_04_0207 + 20933319-20933427,20933503-20933701,20933785-209339... 29 3.0
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 29 3.0
12_01_1048 + 10770461-10770612,10770721-10770730,10771457-107716... 29 3.9
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042... 29 3.9
03_05_0232 + 22174516-22174768,22175278-22175471,22175557-221756... 29 5.2
01_06_0910 - 32922459-32922646,32922725-32922823,32923371-329235... 29 5.2
04_03_1008 + 21691299-21691413,21691524-21691863,21692344-216924... 28 6.9
12_02_0437 - 19084990-19087695 28 9.1
>12_02_0999 -
25134828-25135113,25135479-25135535,25136171-25136296,
25136399-25137289,25137379-25137533
Length = 504
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -1
Query: 625 GQDYCVSTSRCHCF---NLTLPSSCKVYK*VHS*AEVPKDDFSW 503
G C +T RCHC L + S KV + A++P D++SW
Sbjct: 333 GSGKCATTGRCHCSKRRKLRIKRSIKVPAISNKIADIPPDEYSW 376
>03_05_1079 +
30222017-30222903,30222992-30223117,30223752-30223808,
30224883-30224913,30225159-30225236,30225297-30225383
Length = 421
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -1
Query: 625 GQDYCVSTSRCHCF---NLTLPSSCKVYK*VHS*AEVPKDDFSW 503
G C + SRCHC L + S KV + A++P D+FSW
Sbjct: 280 GSGRCTTGSRCHCAKKRKLRIRRSIKVPAISNKVADIPADEFSW 323
>01_06_0560 +
30244814-30244871,30244979-30245140,30245725-30245786,
30246170-30246214,30246358-30246363,30246424-30246624,
30246735-30248024
Length = 607
Score = 32.3 bits (70), Expect = 0.42
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 578 EIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
++ AVAAG AHT+ LT VY+ G +G+
Sbjct: 4 KVVAVAAGEAHTLALTGDGEVYSWGRGMFGR 34
>07_03_0265 +
15976331-15976645,15977575-15977784,15977869-15977916,
15978307-15978675,15978736-15978747,15978763-15978870,
15979156-15979493,15980313-15980430,15983247-15984107,
15984457-15984750
Length = 890
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 575 CEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
C VA G + T+ILT VYT G+N +GQ
Sbjct: 187 CGHGEVATGLSFTVILTTDGQVYTCGSNTHGQ 218
>04_04_1475 +
33856351-33856582,33857614-33857781,33858156-33858261,
33858391-33858442,33858525-33858642,33858736-33858766,
33858962-33858985,33859075-33859199,33860087-33860168,
33860319-33860441,33860539-33860592,33860669-33860738,
33861276-33861309,33861824-33862170
Length = 521
Score = 31.9 bits (69), Expect = 0.56
Identities = 10/41 (24%), Positives = 25/41 (60%)
Frame = +2
Query: 548 FIYLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
++++ + ++ + GR HT+++TD ++ G+N +GQ
Sbjct: 85 YLWVLNVFRYKVIKASVGRNHTVVVTDDGKSFSFGHNKHGQ 125
>05_05_0087 -
22291732-22292029,22292967-22293034,22293640-22293723,
22295967-22296010,22296210-22296300,22296452-22296634,
22297594-22297637,22298122-22298355,22298452-22298712,
22298790-22298915,22298993-22299077,22299171-22299244,
22299988-22300186
Length = 596
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 563 RAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
RA C +KA+A G H+ ++TD + T G YGQ
Sbjct: 307 RAATC-VKAIACGGRHSAVVTDSGTLLTFGWGLYGQ 341
Score = 31.5 bits (68), Expect = 0.74
Identities = 29/94 (30%), Positives = 38/94 (40%)
Frame = +2
Query: 389 ITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIILWNFCLAMHLFIYLTRA 568
I +A G TV TS V+ G N Q+G S + I+ A L R
Sbjct: 364 IQRVAAGLWHTVC---TSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLENNHARG 420
Query: 569 WECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
C G H+ ++TDK V+ G N YGQ
Sbjct: 421 VSC-------GARHSAVITDKGDVFCWGWNKYGQ 447
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 578 EIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
+I+ VAAG HT+ + VY+ G N +GQ
Sbjct: 363 KIQRVAAGLWHTVCTSADGDVYSFGGNQFGQ 393
>02_04_0474 -
23202739-23203011,23203103-23203469,23203592-23203990,
23204060-23204397,23204558-23204782,23205025-23205073,
23205281-23205462
Length = 610
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 545 LFIYLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
+F Y+ A E + AG H+I++T K Y+ G N +GQ
Sbjct: 209 VFKYIV-ARERNYSRIVAGPGHSIVVTTKGDAYSFGANCWGQ 249
>01_06_0393 +
28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 31.5 bits (68), Expect = 0.74
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = +2
Query: 383 FDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIILWNFCLAMHLFIYLT 562
++ +ACG+ TVA + TS +VF G +++ Q+G +P+ CL
Sbjct: 693 YNFHQLACGHNMTVA-LATSG--RVFTMGSSSNGQLG--NPKSDGKQP-CLVQDRL---- 742
Query: 563 RAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
A E ++ ++ G +H +LT + VYT G A G+
Sbjct: 743 -ASEL-VEEISCGASHVTVLTSRSEVYTWGMGANGR 776
>08_02_0755 -
20814074-20814268,20814909-20814965,20815047-20815157,
20815291-20815344,20815731-20815943,20816655-20816773,
20816880-20816940,20817037-20817147,20817239-20817383,
20817477-20817523
Length = 370
Score = 31.1 bits (67), Expect = 0.97
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 581 IKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
+K +A G H + LT+ ++ GNN YGQ
Sbjct: 180 VKVIAVGAFHNLALTEDGILWAWGNNEYGQ 209
>01_06_1331 +
36373059-36373338,36374190-36374263,36374530-36374699,
36374731-36374822,36375087-36375323,36375922-36375980,
36376462-36376644,36377347-36377437,36377959-36378002,
36378085-36378207
Length = 450
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 584 KAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
+AV+ G H+ I+TD+ V+ G N YGQ
Sbjct: 382 RAVSCGARHSAIITDEGEVFCWGWNKYGQ 410
>05_01_0048 +
331155-333077,333208-333354,333540-334087,334481-334616
Length = 917
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Frame = +2
Query: 398 IACGYGFTVASIKTSEQH--------KVFGTGINTDSQIGYHSPREIILWNFCLAMHLFI 553
+ACG T A ++ H K+F G ++G H +E L C+A +
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLG-HGDKESRLKPTCVASLI-- 297
Query: 554 YLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
+ + VA G + T+ LT V ++GN+ YGQ
Sbjct: 298 ------DYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 330
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 581 IKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
+ VAA + HT+I T+ ++T G+N GQ
Sbjct: 245 VNVVAAAKHHTVIATEAGELFTWGSNREGQ 274
>09_06_0274 +
21967740-21968230,21968411-21968550,21968711-21968905,
21969524-21969652,21970063-21970218,21970507-21970589,
21972229-21972433,21972601-21972805,21973059-21973194,
21973990-21974164,21974470-21974528,21974642-21974716,
21974804-21974920,21975010-21975080,21975170-21975473,
21975721-21976086,21976404-21976514
Length = 1005
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 569 WECEIKAVAAGRAHTIILTDKEGVYTLGNN 658
WE +I +A AHT +TD +YT G +
Sbjct: 190 WEGKISHIATSGAHTAAITDSGELYTWGRD 219
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 590 VAAGRAHTIILTDKEGVYTLGNNAYGQ 670
+A G T+ LT VYT+G+ YGQ
Sbjct: 606 IACGHCMTVALTTSGHVYTMGSPVYGQ 632
>02_04_0207 +
20933319-20933427,20933503-20933701,20933785-20933931,
20934683-20934764,20935542-20935697,20935948-20936121,
20936278-20936349,20937012-20937083,20937322-20937440,
20937540-20937625,20937747-20937799,20938076-20938153
Length = 448
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/107 (25%), Positives = 41/107 (38%)
Frame = +2
Query: 347 VWHPMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIILWN 526
V++P + IT IACG +A H G N + Q+G + + +L
Sbjct: 117 VFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHS---WGRNQNGQLGLGNTEDSLLPQ 173
Query: 527 FCLAMHLFIYLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYG 667
A +K +AAG HT +T+ +Y G YG
Sbjct: 174 KIQAFE---------GVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 590 VAAGRAHTIILTDKEGVYTLGNNAYGQ 670
VA G HTI ++ +YT G + YGQ
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQ 264
>01_07_0198 -
41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 590 VAAGRAHTIILTDKEGVYTLGNNAYGQ 670
VA G T+ LT VYT+G+ YGQ
Sbjct: 532 VACGHCLTVALTTSGHVYTMGSAVYGQ 558
>12_01_1048 +
10770461-10770612,10770721-10770730,10771457-10771624,
10771668-10772017,10772107-10772508,10772940-10773318,
10773801-10774046
Length = 568
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 596 AGRAHTIILTDKEGVYTLGNNAYGQ 670
AG H+I +T VYT G+N+ GQ
Sbjct: 187 AGPGHSIAVTTSGAVYTFGSNSSGQ 211
>04_04_1657 -
35102751-35102868,35102987-35103504,35104065-35104211,
35104289-35106262,35106964-35107089,35107178-35107264,
35107335-35107424,35107725-35107811,35108248-35108300,
35109339-35109387
Length = 1082
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 578 EIKAVAAGRAHTIILTDKEGVYTLGNNAYG 667
++ AV+ G HT ++T +YT G+ +G
Sbjct: 394 QVSAVSCGTWHTALITSSGKLYTFGDGTFG 423
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/107 (23%), Positives = 47/107 (43%)
Frame = +2
Query: 344 LVWHPMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIILW 523
LV P+ S+ D++ +ACG A++ T Q +VF G ++G+ + I
Sbjct: 275 LVPKPLESNVM--LDVSYVACGVKH--AALVT-RQAEVFTWGEECSGRLGHGAGTSIFQP 329
Query: 524 NFCLAMHLFIYLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAY 664
++ + C ++ +A G HT +T +YT G+ +
Sbjct: 330 RLVESLSI---------CNVETIACGEFHTCAITATGDLYTWGDGTH 367
>03_05_0232 +
22174516-22174768,22175278-22175471,22175557-22175604,
22176707-22176784,22178073-22178145,22178406-22178577,
22179652-22180083,22180209-22180400,22180696-22180771
Length = 505
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 590 VAAGRAHTIILTDKEGVYTLGNNAYGQ 670
VA GR HT + +YT G N +GQ
Sbjct: 65 VACGRGHTAAVASDGSLYTWGANDFGQ 91
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 581 IKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
++ V G +HT++ +Y G N+YGQ
Sbjct: 371 VQLVTCGHSHTLVSMKDSRIYGWGYNSYGQ 400
>01_06_0910 -
32922459-32922646,32922725-32922823,32923371-32923502,
32923585-32923743,32924553-32924711,32924897-32925052,
32925846-32926044
Length = 363
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 581 IKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
+ VA G AH I LT V+T G +GQ
Sbjct: 52 VSFVAGGGAHAIALTSDGEVFTWGRGTHGQ 81
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 578 EIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
++ +AAG H+ +TDK V+T G +GQ
Sbjct: 286 QVVHIAAGTEHSASVTDKGTVFTWGWGEHGQ 316
>04_03_1008 +
21691299-21691413,21691524-21691863,21692344-21692425,
21692905-21693060,21694171-21694344,21694485-21694556,
21695289-21695360,21695473-21695591,21695692-21695777,
21695867-21695919,21696058-21696150
Length = 453
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 578 EIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
++ VA G HT+ T+K+ V++ G GQ
Sbjct: 338 KVAQVACGWRHTLAFTEKKNVFSWGRGTSGQ 368
>12_02_0437 - 19084990-19087695
Length = 901
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 67 LIVVCLEI*LICMQLNF*YTGEVLFSC*IEFP 162
LI +C L+C++LN Y GE L C FP
Sbjct: 789 LISLCKMANLVCLELNCAYDGEALRFCAEWFP 820
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,323,062
Number of Sequences: 37544
Number of extensions: 394367
Number of successful extensions: 942
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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