Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30755.Seq
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical...    42   4e-04
Z82080-8|CAD92382.3|  404|Caenorhabditis elegans Hypothetical pr...    41   0.001
AL032625-7|CAN86642.1|  404|Caenorhabditis elegans Hypothetical ...    41   0.001
AL023854-1|CAH60790.2|  404|Caenorhabditis elegans Hypothetical ...    41   0.001
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los...    40   0.001
Z83115-1|CAB05555.1|  178|Caenorhabditis elegans Hypothetical pr...    33   0.16 
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    33   0.21 
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ...    33   0.21 
AC025716-18|AAT81178.1|  998|Caenorhabditis elegans Hypothetical...    32   0.50 
U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.1 protein.
          Length = 1019

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 31/100 (31%), Positives = 51/100 (51%)
 Frame = +2

Query: 389 ITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIILWNFCLAMHLFIYLTRA 568
           +T++ CG   TV   K     K++  G N D Q+G  S  E        +++   + + A
Sbjct: 43  VTSVTCGEQHTVFLTKDG---KMWSVGSNMDGQLGRGSRTE-----GSFSIYPVSWTSSA 94

Query: 569 WECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQWR*ESK 688
              +I  ++AGR+HT+ +TD   V+  G+N +GQ   ESK
Sbjct: 95  ---KIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESK 131


>Z82080-8|CAD92382.3|  404|Caenorhabditis elegans Hypothetical
           protein W09G3.7a protein.
          Length = 404

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 30/105 (28%), Positives = 55/105 (52%)
 Frame = +2

Query: 356 PMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIILWNFCL 535
           P R ++     I  I+ G+GF++ + K    ++++G GIN   QIG     ++   N   
Sbjct: 57  PKRIAYFNTKSIKFISSGFGFSLFASK----NRLYGAGINNRFQIG----GQLTNINKYQ 108

Query: 536 AMHLFIYLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
             ++          EI  +++GRAH++I T+  GV+ +G+N +GQ
Sbjct: 109 DYYISAKKINIPGDEILEISSGRAHSLIRTNL-GVFAIGDNNFGQ 152


>AL032625-7|CAN86642.1|  404|Caenorhabditis elegans Hypothetical
           protein W09G3.7a protein.
          Length = 404

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 30/105 (28%), Positives = 55/105 (52%)
 Frame = +2

Query: 356 PMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIILWNFCL 535
           P R ++     I  I+ G+GF++ + K    ++++G GIN   QIG     ++   N   
Sbjct: 57  PKRIAYFNTKSIKFISSGFGFSLFASK----NRLYGAGINNRFQIG----GQLTNINKYQ 108

Query: 536 AMHLFIYLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
             ++          EI  +++GRAH++I T+  GV+ +G+N +GQ
Sbjct: 109 DYYISAKKINIPGDEILEISSGRAHSLIRTNL-GVFAIGDNNFGQ 152


>AL023854-1|CAH60790.2|  404|Caenorhabditis elegans Hypothetical
           protein W09G3.7a protein.
          Length = 404

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 30/105 (28%), Positives = 55/105 (52%)
 Frame = +2

Query: 356 PMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIILWNFCL 535
           P R ++     I  I+ G+GF++ + K    ++++G GIN   QIG     ++   N   
Sbjct: 57  PKRIAYFNTKSIKFISSGFGFSLFASK----NRLYGAGINNRFQIG----GQLTNINKYQ 108

Query: 536 AMHLFIYLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
             ++          EI  +++GRAH++I T+  GV+ +G+N +GQ
Sbjct: 109 DYYISAKKINIPGDEILEISSGRAHSLIRTNL-GVFAIGDNNFGQ 152


>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
           protein 4 protein.
          Length = 1392

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +2

Query: 575 CEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
           C++  +A GRAHT++LTD   V   G+ +YGQ
Sbjct: 880 CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQ 911



 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 590  VAAGRAHTIILTDKEGVYTLGNNAYGQ 670
            V+ G  HTI  TD   V+  G N +GQ
Sbjct: 1079 VSLGNNHTIASTDDGSVFAWGKNDFGQ 1105


>Z83115-1|CAB05555.1|  178|Caenorhabditis elegans Hypothetical
           protein K11D2.1 protein.
          Length = 178

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 581 IKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
           IK VA G  HT+ LT+    YT G N YGQ
Sbjct: 135 IKKVACGGWHTVALTEGGDAYTWGWNRYGQ 164


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
           presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 572 ECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
           + ++ +V+ G  HT++L     V+T G+N +GQ
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQ 798


>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
           protein F07B7.12 protein.
          Length = 1900

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 572 ECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
           + ++ +V+ G  HT++L     V+T G+N +GQ
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQ 798


>AC025716-18|AAT81178.1|  998|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.3 protein.
          Length = 998

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
 Frame = +2

Query: 356 PMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIG------YHSPREII 517
           PM      R +I +I CG+   VA +++ E     G G N   Q+G      + +P ++ 
Sbjct: 561 PMLLEQLLRENIKDIYCGHDHVVAVLESGE---CLGWGSNQYGQLGLPTLEHFFAPTKVF 617

Query: 518 LWNFCLAMHLFIYLTRAWECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
             N   A++    +      +I    AG+  T++L+D   +  +G+N + +
Sbjct: 618 FLNEATALYGPFQIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNK 668



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 581 IKAVAAGRAHTIILTDKEGVYTLGNNAYGQ 670
           IK VA  + HT++LT+   ++  G+N+ GQ
Sbjct: 469 IKQVALSKTHTMVLTNDNELFGFGDNSCGQ 498


>U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical
           protein K09F5.6 protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 391 NKHSLWLRFHSSLNKNFRAAQSFRYRYQYRFPNWIPFTTRNHPLELLLSYAPIYI 555
           N  S+W    ++L +++     F    +YR  N I + T  +P   L++YA IY+
Sbjct: 11  NLSSIWYTILTTLLQSYLLYLGFE---RYRLYNEIKWPTGGYPYGYLMAYATIYL 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,570
Number of Sequences: 27780
Number of extensions: 365480
Number of successful extensions: 1022
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)