Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30753.Seq
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein. 33 0.82
AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein pr... 33 0.82
AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein. 33 0.82
Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1... 32 1.9
Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1... 32 1.9
AB064033-1|BAC01661.1| 111|Homo sapiens immunoglobulin lambda l... 28 6.8
AB064142-1|BAC01770.1| 274|Homo sapiens immunoglobulin lambda l... 28 7.8
>BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein.
Length = 954
Score = 33.5 bits (73), Expect = 0.82
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Frame = +2
Query: 344 PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSV--- 514
P + GP + KRS R+ + + +R H P R+ P ++R
Sbjct: 667 PSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHS-PSERSHHSPSERRHHSPSE 725
Query: 515 --HASPARELSRDTPDYQYGRFDASALHIAHALKQ--TELQKAYHRPREKPIDCYLDRDE 682
H SP+ E S +P + R + H + + K + ++++H P E+ L+R
Sbjct: 726 RSHCSPS-ERSHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSERRRHSPLERSR 784
Query: 683 QTKLEMKHR 709
+ LE HR
Sbjct: 785 HSLLERSHR 793
Score = 31.5 bits (68), Expect = 3.3
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHAS 523
P + R P + +RSQR+ + QR H P + S P ++ W S
Sbjct: 523 PSERTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCS-PSRKNHSSPSERSWR---S 578
Query: 524 PARELSRDTPDYQYGRFDASALHI-AHALKQTELQKAYHRPREKPIDCYLDRDEQTKLEM 700
P++ P+ LH + + Q+ +H P E+ +R ++ E
Sbjct: 579 PSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERSHRSPSER 638
Query: 701 KHRQXKTICYR 733
+HR +R
Sbjct: 639 RHRSPSQRSHR 649
>AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 33.5 bits (73), Expect = 0.82
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Frame = +2
Query: 344 PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSV--- 514
P + GP + KRS R+ + + +R H P R+ P ++R
Sbjct: 558 PSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHS-PSERSHHSPSERRHHSPSE 616
Query: 515 --HASPARELSRDTPDYQYGRFDASALHIAHALKQ--TELQKAYHRPREKPIDCYLDRDE 682
H SP+ E S +P + R + H + + K + ++++H P E+ L+R
Sbjct: 617 RSHCSPS-ERSHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSERRRHSPLERSR 675
Query: 683 QTKLEMKHR 709
+ LE HR
Sbjct: 676 HSLLERSHR 684
Score = 31.5 bits (68), Expect = 3.3
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHAS 523
P + R P + +RSQR+ + QR H P + S P ++ W S
Sbjct: 414 PSERTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCS-PSRKNHSSPSERSWR---S 469
Query: 524 PARELSRDTPDYQYGRFDASALHI-AHALKQTELQKAYHRPREKPIDCYLDRDEQTKLEM 700
P++ P+ LH + + Q+ +H P E+ +R ++ E
Sbjct: 470 PSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERSHRSPSER 529
Query: 701 KHRQXKTICYR 733
+HR +R
Sbjct: 530 RHRSPSQRSHR 540
>AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein.
Length = 939
Score = 33.5 bits (73), Expect = 0.82
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Frame = +2
Query: 344 PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSV--- 514
P + GP + KRS R+ + + +R H P R+ P ++R
Sbjct: 652 PSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHS-PSERSHHSPSERRHHSPSE 710
Query: 515 --HASPARELSRDTPDYQYGRFDASALHIAHALKQ--TELQKAYHRPREKPIDCYLDRDE 682
H SP+ E S +P + R + H + + K + ++++H P E+ L+R
Sbjct: 711 RSHCSPS-ERSHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSERRRHSPLERSR 769
Query: 683 QTKLEMKHR 709
+ LE HR
Sbjct: 770 HSLLERSHR 778
Score = 31.9 bits (69), Expect = 2.5
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHAS 523
P + R P + +RSQR+ + QR H P + S P ++ W S
Sbjct: 508 PSERTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCS-PSRKNHSSPSERSWR---S 563
Query: 524 PARELSRDTPDYQYGRFDASALHI-AHALKQTELQKAYHRPREKPIDCYLDRDEQTKLEM 700
P++ P+ LH + + Q+ +H P E+ +R ++ E
Sbjct: 564 PSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERSHRSSSER 623
Query: 701 KHRQXKTICYR 733
+HR +R
Sbjct: 624 RHRSPSQRSHR 634
>Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1
protein.
Length = 1324
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHV-PKIGPGHLDN--SSVGIRSALNVP 416
FKC +CG + + K H+ KE Y + P P HLDN +S GI +++P
Sbjct: 477 FKCNICGNRFSTKGNL-KVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIP 533
>Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1
protein.
Length = 1324
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHV-PKIGPGHLDN--SSVGIRSALNVP 416
FKC +CG + + K H+ KE Y + P P HLDN +S GI +++P
Sbjct: 477 FKCNICGNRFSTKGNL-KVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIP 533
>AB064033-1|BAC01661.1| 111|Homo sapiens immunoglobulin lambda
light chain VLJ region protein.
Length = 111
Score = 28.3 bits (60), Expect(2) = 6.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 737 ISCNKSSSXAGVSFQVWFAHLDPSSSL*VFLSADGRLSG 621
ISC+ SSS G ++ W+ HL ++ + D R SG
Sbjct: 20 ISCSGSSSNIGDNYVSWYQHLPGTAPKLLIYDNDERPSG 58
Score = 21.0 bits (42), Expect(2) = 6.8
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 638 DGRLSGALF 612
DGRLSGA+F
Sbjct: 93 DGRLSGAVF 101
>AB064142-1|BAC01770.1| 274|Homo sapiens immunoglobulin lambda
light chain VLJ region protein.
Length = 274
Score = 27.9 bits (59), Expect(2) = 7.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 737 ISCNKSSSXAGVSFQVWFAHLDPSSSL*VFLSADGRLSG 621
ISC SSS G ++ W+ HL ++ + D R SG
Sbjct: 42 ISCTGSSSNIGDNYVSWYQHLPGTAPKLLIYDNDERPSG 80
Score = 21.0 bits (42), Expect(2) = 7.8
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 638 DGRLSGALF 612
DGRLSGA+F
Sbjct: 115 DGRLSGAVF 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,105,456
Number of Sequences: 237096
Number of extensions: 2598812
Number of successful extensions: 7306
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7306
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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