Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30751.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.6  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    23   5.0  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   6.6  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   8.8  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   8.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 80  ETNVLKQEYTPDLHLTSPPTCLQWTTV 160
           E   +  +YT D   T+P  CL+ TT+
Sbjct: 569 EFEFISPQYTVDKVATNPQNCLKQTTI 595


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 153 VHCRQVGGDVK*RSGVYSCL 94
           V  RQ+G + + R GVY+CL
Sbjct: 241 VIARQIGIENELREGVYTCL 260


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 35  YSTITKDGRLKIWDTETNVLKQEYTPDLH 121
           Y+ I K+G +  +D   N      T D+H
Sbjct: 116 YAEIDKNGNIASFDNRGNTYNHSGTGDIH 144


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 248 CLILCIGTHFRLYSH 204
           CLI C+GT  R +++
Sbjct: 67  CLIFCVGTDLRWWNN 81


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 248 CLILCIGTHFRLYSH 204
           CLI C+GT  R +++
Sbjct: 67  CLIFCVGTDLRWWNN 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,718
Number of Sequences: 2352
Number of extensions: 10013
Number of successful extensions: 57
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)