Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30748.Seq
(497 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070685-1|AAL48156.1| 192|Drosophila melanogaster RH21245p pro... 60 2e-09
AY051593-1|AAK93017.1| 383|Drosophila melanogaster GH23546p pro... 60 2e-09
AJ245747-1|CAB52474.1| 383|Drosophila melanogaster fatty acid d... 60 2e-09
AE014297-1531|AAN13544.1| 383|Drosophila melanogaster CG5887-PE... 60 2e-09
AE014297-1530|AAF54822.1| 383|Drosophila melanogaster CG5887-PD... 60 2e-09
AE014297-1529|AAF54821.1| 383|Drosophila melanogaster CG5887-PC... 60 2e-09
AE014297-1528|AAF54820.1| 383|Drosophila melanogaster CG5887-PB... 60 2e-09
AE014297-1527|AAF54819.1| 383|Drosophila melanogaster CG5887-PA... 60 2e-09
U73160-1|AAB17283.1| 383|Drosophila melanogaster fatty acid des... 59 4e-09
BT023260-1|AAY55676.1| 339|Drosophila melanogaster IP02693p pro... 51 8e-07
AE014296-1871|AAF50118.1| 355|Drosophila melanogaster CG7923-PA... 51 8e-07
AM773627-1|CAO79269.1| 355|Drosophila melanogaster desaturase p... 51 1e-06
AJ271414-1|CAB69053.1| 355|Drosophila melanogaster fatty acid d... 51 1e-06
BT024427-1|ABC86489.1| 361|Drosophila melanogaster IP02593p pro... 48 7e-06
AJ271415-1|CAB69054.1| 361|Drosophila melanogaster fatty acid d... 48 7e-06
AE014297-1525|AAF54817.2| 361|Drosophila melanogaster CG5925-PA... 48 7e-06
AB055101-1|BAB21540.1| 361|Drosophila melanogaster fatty acid d... 48 7e-06
AB055100-1|BAB21539.1| 361|Drosophila melanogaster fatty acid d... 48 7e-06
AB055099-1|BAB21538.1| 361|Drosophila melanogaster fatty acid d... 48 7e-06
AB055098-1|BAB21537.1| 361|Drosophila melanogaster fatty acid d... 48 7e-06
BT023167-1|AAY55583.1| 354|Drosophila melanogaster IP10809p pro... 45 7e-05
BT023095-1|AAY55511.1| 354|Drosophila melanogaster IP10909p pro... 45 7e-05
BT023007-1|AAY55423.1| 354|Drosophila melanogaster IP11109p pro... 45 7e-05
AE014297-4560|AAF57021.1| 334|Drosophila melanogaster CG15531-P... 45 7e-05
AY119637-1|AAM50291.1| 408|Drosophila melanogaster RE43130p pro... 44 1e-04
AE014297-1646|AAF54920.2| 408|Drosophila melanogaster CG8630-PA... 44 1e-04
BT023162-1|AAY55578.1| 320|Drosophila melanogaster IP09405p pro... 37 0.017
AY094910-1|AAM11263.1| 420|Drosophila melanogaster RH14937p pro... 33 0.16
AE014297-4561|AAF57022.2| 420|Drosophila melanogaster CG9743-PA... 33 0.16
AY118662-1|AAM50031.1| 642|Drosophila melanogaster SD10038p pro... 28 8.1
AF289995-1|AAG02460.1| 642|Drosophila melanogaster thyroid horm... 28 8.1
AF244916-1|AAF63336.1| 642|Drosophila melanogaster mediator tra... 28 8.1
AE014297-2456|AAF55506.1| 642|Drosophila melanogaster CG7957-PA... 28 8.1
>AY070685-1|AAL48156.1| 192|Drosophila melanogaster RH21245p
protein.
Length = 192
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI YLH+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>AY051593-1|AAK93017.1| 383|Drosophila melanogaster GH23546p
protein.
Length = 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI YLH+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>AJ245747-1|CAB52474.1| 383|Drosophila melanogaster fatty acid
desaturase protein.
Length = 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI + Y H+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RRLKLVWRNIIVFGYFHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>AE014297-1531|AAN13544.1| 383|Drosophila melanogaster CG5887-PE,
isoform E protein.
Length = 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI YLH+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>AE014297-1530|AAF54822.1| 383|Drosophila melanogaster CG5887-PD,
isoform D protein.
Length = 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI YLH+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>AE014297-1529|AAF54821.1| 383|Drosophila melanogaster CG5887-PC,
isoform C protein.
Length = 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI YLH+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>AE014297-1528|AAF54820.1| 383|Drosophila melanogaster CG5887-PB,
isoform B protein.
Length = 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI YLH+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>AE014297-1527|AAF54819.1| 383|Drosophila melanogaster CG5887-PA,
isoform A protein.
Length = 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI YLH+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>U73160-1|AAB17283.1| 383|Drosophila melanogaster fatty acid
desaturase protein.
Length = 383
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R ++V++NI YLH+ YG YL T+A+W + AY YV + + +TAGAHRLW
Sbjct: 66 RLLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLW 123
>BT023260-1|AAY55676.1| 339|Drosophila melanogaster IP02693p
protein.
Length = 339
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
E+V+ NI + + LH++ YG +L T+A W + +P V + V+ GAHRLW
Sbjct: 41 ELVWVNIVLFVILHISSLYGVWLLFTSATWTTVVLFWPTVVVTILGVSGGAHRLW 95
>AE014296-1871|AAF50118.1| 355|Drosophila melanogaster CG7923-PA
protein.
Length = 355
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
E+V+ NI + + LH++ YG +L T+A W + +P V + V+ GAHRLW
Sbjct: 40 ELVWVNIVLFVILHISSLYGVWLLFTSATWTTVVLFWPTVVVTILGVSGGAHRLW 94
>AM773627-1|CAO79269.1| 355|Drosophila melanogaster desaturase
protein.
Length = 355
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
E+V+ NI + + LH++ YG +L T+A W + +P V + V+ GAHRLW
Sbjct: 40 ELVWFNIVLFVILHISSLYGVWLLFTSATWTTVVLFWPTVVVTILGVSGGAHRLW 94
>AJ271414-1|CAB69053.1| 355|Drosophila melanogaster fatty acid
desaturase protein.
Length = 355
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
E+V+ NI + + LH++ YG +L T+A W + +P V + V+ GAHRLW
Sbjct: 40 ELVWFNIVLFVILHISSLYGVWLLFTSATWTTVVLFWPTVVVTILGVSGGAHRLW 94
>BT024427-1|ABC86489.1| 361|Drosophila melanogaster IP02593p
protein.
Length = 361
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R +V++NI + +H+ YG + T A+ A+ FA Y+ + VTAGAHRLW
Sbjct: 45 RRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHRLW 102
>AJ271415-1|CAB69054.1| 361|Drosophila melanogaster fatty acid
desaturase protein.
Length = 361
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R +V++NI + +H+ YG + T A+ A+ FA Y+ + VTAGAHRLW
Sbjct: 45 RRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHRLW 102
>AE014297-1525|AAF54817.2| 361|Drosophila melanogaster CG5925-PA
protein.
Length = 361
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R +V++NI + +H+ YG + T A+ A+ FA Y+ + VTAGAHRLW
Sbjct: 45 RRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHRLW 102
>AB055101-1|BAB21540.1| 361|Drosophila melanogaster fatty acid
desaturase 2 protein.
Length = 361
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R +V++NI + +H+ YG + T A+ A+ FA Y+ + VTAGAHRLW
Sbjct: 45 RRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHRLW 102
>AB055100-1|BAB21539.1| 361|Drosophila melanogaster fatty acid
desaturase 2 protein.
Length = 361
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R +V++NI + +H+ YG + T A+ A+ FA Y+ + VTAGAHRLW
Sbjct: 45 RRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHRLW 102
>AB055099-1|BAB21538.1| 361|Drosophila melanogaster fatty acid
desaturase 2 protein.
Length = 361
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R +V++NI + +H+ YG + T A+ A+ FA Y+ + VTAGAHRLW
Sbjct: 45 RRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHRLW 102
>AB055098-1|BAB21537.1| 361|Drosophila melanogaster fatty acid
desaturase 2 protein.
Length = 361
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
R +V++NI + +H+ YG + T A+ A+ FA Y+ + VTAGAHRLW
Sbjct: 45 RRLPLVWRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHRLW 102
>BT023167-1|AAY55583.1| 354|Drosophila melanogaster IP10809p
protein.
Length = 354
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLWGP 438
++ + ++ + +I+L++ YG Y+ T+A WA+ F + T+ VT G HRLW
Sbjct: 38 KKRDAIWPLVLFYIHLNILGVYGIYVLLTSASWATILFTALLTLLGTLGVTVGVHRLWA- 96
Query: 439 QILQSEITSSNPTK 480
T+S P K
Sbjct: 97 ---HRTFTASKPLK 107
>BT023095-1|AAY55511.1| 354|Drosophila melanogaster IP10909p
protein.
Length = 354
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLWGP 438
++ + ++ + +I+L++ YG Y+ T+A WA+ F + T+ VT G HRLW
Sbjct: 38 KKRDAIWPLVLFYIHLNILGVYGIYVLLTSASWATILFTALLTLLGTLGVTVGVHRLWA- 96
Query: 439 QILQSEITSSNPTK 480
T+S P K
Sbjct: 97 ---HRTFTASKPLK 107
>BT023007-1|AAY55423.1| 354|Drosophila melanogaster IP11109p
protein.
Length = 354
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLWGP 438
++ + ++ + +I+L++ YG Y+ T+A WA+ F + T+ VT G HRLW
Sbjct: 38 KKRDAIWPLVLFYIHLNILGVYGIYVLLTSASWATILFTALLTLLGTLGVTVGVHRLWA- 96
Query: 439 QILQSEITSSNPTK 480
T+S P K
Sbjct: 97 ---HRTFTASKPLK 107
>AE014297-4560|AAF57021.1| 334|Drosophila melanogaster CG15531-PA
protein.
Length = 334
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLWGP 438
++ + ++ + +I+L++ YG Y+ T+A WA+ F + T+ VT G HRLW
Sbjct: 18 KKRDAIWPLVLFYIHLNILGVYGIYVLLTSASWATILFTALLTLLGTLGVTVGVHRLWA- 76
Query: 439 QILQSEITSSNPTK 480
T+S P K
Sbjct: 77 ---HRTFTASKPLK 87
>AY119637-1|AAM50291.1| 408|Drosophila melanogaster RE43130p
protein.
Length = 408
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 238 QTFSGXPREYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVA---ATICV 408
+T P E EIV++N+ + + LH YG YL + ++W P Y + +
Sbjct: 51 KTPENKPYELEIVWRNVGLFVILHSMALYGLYLVFAES---AYWELLPVYATMFLGGLGI 107
Query: 409 TAGAHRLWGPQILQSEI 459
TAG HRLW + ++++
Sbjct: 108 TAGVHRLWSHKAYKAKL 124
>AE014297-1646|AAF54920.2| 408|Drosophila melanogaster CG8630-PA
protein.
Length = 408
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 238 QTFSGXPREYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVA---ATICV 408
+T P E EIV++N+ + + LH YG YL + ++W P Y + +
Sbjct: 51 KTPENKPYELEIVWRNVGLFVILHSMALYGLYLVFAES---AYWELLPVYATMFLGGLGI 107
Query: 409 TAGAHRLWGPQILQSEI 459
TAG HRLW + ++++
Sbjct: 108 TAGVHRLWSHKAYKAKL 124
>BT023162-1|AAY55578.1| 320|Drosophila melanogaster IP09405p
protein.
Length = 320
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 259 REYEIVYKNIFIHIYLHVTMFYGPYLCCTTAQW 357
R ++V++NI YLH+ YG YL T+A+W
Sbjct: 66 RRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKW 98
>AY094910-1|AAM11263.1| 420|Drosophila melanogaster RH14937p
protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
+I + ++ +LH+ YG Y + W +V+ I +TAGAHRLW
Sbjct: 100 QIRWPDLGAQAFLHIGALYGLYQLFYANFYTFLWVVVTVWVSG-IGITAGAHRLW 153
>AE014297-4561|AAF57022.2| 420|Drosophila melanogaster CG9743-PA
protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGPYLCCTTAQWASHWFAYPCYVAATICVTAGAHRLW 432
+I + ++ +LH+ YG Y + W +V+ I +TAGAHRLW
Sbjct: 100 QIRWPDLGAQAFLHIGALYGLYQLFYANFYTFLWVVVTVWVSG-IGITAGAHRLW 153
>AY118662-1|AAM50031.1| 642|Drosophila melanogaster SD10038p
protein.
Length = 642
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 HYHVLDXNLLFRLQSVHYTSDFVPFSH 156
H HVL+ +L L+ VHY + PF H
Sbjct: 359 HDHVLEHSLHQLLREVHYKNSHHPFPH 385
>AF289995-1|AAG02460.1| 642|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP80 protein.
Length = 642
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 HYHVLDXNLLFRLQSVHYTSDFVPFSH 156
H HVL+ +L L+ VHY + PF H
Sbjct: 359 HDHVLEHSLHQLLREVHYKNSHHPFPH 385
>AF244916-1|AAF63336.1| 642|Drosophila melanogaster mediator
transcriptional cofactorTRAP80 protein.
Length = 642
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 HYHVLDXNLLFRLQSVHYTSDFVPFSH 156
H HVL+ +L L+ VHY + PF H
Sbjct: 359 HDHVLEHSLHQLLREVHYKNSHHPFPH 385
>AE014297-2456|AAF55506.1| 642|Drosophila melanogaster CG7957-PA
protein.
Length = 642
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 HYHVLDXNLLFRLQSVHYTSDFVPFSH 156
H HVL+ +L L+ VHY + PF H
Sbjct: 359 HDHVLEHSLHQLLREVHYKNSHHPFPH 385
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,184,768
Number of Sequences: 53049
Number of extensions: 451800
Number of successful extensions: 816
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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