Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30746.Seq
(440 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q24154 Cluster: 60S ribosomal protein L29; n=12; Endopt... 64 1e-09
UniRef50_A2I402 Cluster: Ribosomal protein L29e-like protein; n=... 62 4e-09
UniRef50_Q84WM0 Cluster: 60S ribosomal protein L29-2; n=4; Arabi... 60 2e-08
UniRef50_Q92366 Cluster: 60S ribosomal protein L29; n=40; Eukary... 60 3e-08
UniRef50_Q0IFR8 Cluster: Putative uncharacterized protein; n=1; ... 56 3e-07
UniRef50_UPI0000F2DCEB Cluster: PREDICTED: similar to ribosomal ... 55 8e-07
UniRef50_P47914 Cluster: 60S ribosomal protein L29; n=251; Eukar... 55 8e-07
UniRef50_UPI0000F2CE67 Cluster: PREDICTED: similar to ribosomal ... 54 2e-06
UniRef50_Q7QPW0 Cluster: GLP_433_2266_2454; n=2; Eukaryota|Rep: ... 51 1e-05
UniRef50_Q4PEG3 Cluster: Putative uncharacterized protein; n=2; ... 50 2e-05
UniRef50_Q4Q178 Cluster: Ribosomal protein L29, putative; n=7; T... 48 9e-05
UniRef50_Q5KDL6 Cluster: Ribosomal protein L29.e, cytosolic, put... 48 9e-05
UniRef50_Q9NAG9 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04
UniRef50_Q54TW3 Cluster: Ribosomal protein L29; n=1; Dictyosteli... 45 8e-04
UniRef50_A5HW97 Cluster: Putative uncharacterized protein; n=2; ... 44 0.001
UniRef50_UPI0001552995 Cluster: PREDICTED: similar to ribosomal ... 43 0.003
UniRef50_UPI000049A0F8 Cluster: 60S ribosomal protein L29; n=1; ... 43 0.003
UniRef50_A0CDP3 Cluster: Chromosome undetermined scaffold_17, wh... 43 0.003
UniRef50_UPI00001CA5CB Cluster: PREDICTED: similar to 60S riboso... 42 0.004
UniRef50_UPI0000DC0BB6 Cluster: UPI0000DC0BB6 related cluster; n... 40 0.018
UniRef50_A6R574 Cluster: Predicted protein; n=1; Ajellomyces cap... 40 0.024
UniRef50_UPI0000D9C65B Cluster: PREDICTED: similar to 60S riboso... 35 0.89
UniRef50_A7RHN0 Cluster: Predicted protein; n=1; Nematostella ve... 32 4.7
UniRef50_Q54KV8 Cluster: HMG1/2 (High mobility group) box-contai... 32 6.3
UniRef50_A5NGQ9 Cluster: Putative uncharacterized protein; n=4; ... 31 8.3
UniRef50_Q7F1T9 Cluster: Putative uncharacterized protein OJ1167... 31 8.3
UniRef50_Q4Y8Z0 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
>UniRef50_Q24154 Cluster: 60S ribosomal protein L29; n=12;
Endopterygota|Rep: 60S ribosomal protein L29 -
Drosophila melanogaster (Fruit fly)
Length = 76
Score = 64.1 bits (149), Expect = 1e-09
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHXPPLAWXQXF*GXKGFARRVT*SQPSNSRGR 347
MAKSKNHTNHNQN+KAHRNGIK+P + RH L F + +AR+ S+ + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVK-R 59
Query: 348 LREKL-PEKQRPR 383
E++ +K +P+
Sbjct: 60 YNERIASQKGKPK 72
>UniRef50_A2I402 Cluster: Ribosomal protein L29e-like protein; n=2;
Neoptera|Rep: Ribosomal protein L29e-like protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 90
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHXPPLAWXQXF*GXKGFA 305
MAKSKNHTNHNQNRK HRNGIKKP++ R+ L Q F + FA
Sbjct: 1 MAKSKNHTNHNQNRKDHRNGIKKPKRYRYESKLGVCQKFLKNQRFA 46
>UniRef50_Q84WM0 Cluster: 60S ribosomal protein L29-2; n=4;
Arabidopsis thaliana|Rep: 60S ribosomal protein L29-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHXPPLAWXQXF*GXKGFARR 311
MAKSKNHT HNQ+ KAH+NGIKKPR+ RH P F + +AR+
Sbjct: 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARK 48
>UniRef50_Q92366 Cluster: 60S ribosomal protein L29; n=40;
Eukaryota|Rep: 60S ribosomal protein L29 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 59.7 bits (138), Expect = 3e-08
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
MAKSKNHTNHNQN+KAHRNGIK+P+K R+
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPQKHRY 29
>UniRef50_Q0IFR8 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 97
Score = 56.0 bits (129), Expect = 3e-07
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
MAKSKNHTNHNQN+KAH+NGI KP++ R+
Sbjct: 1 MAKSKNHTNHNQNQKAHKNGITKPKRQRN 29
>UniRef50_UPI0000F2DCEB Cluster: PREDICTED: similar to ribosomal
protein L29,; n=3; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L29, - Monodelphis
domestica
Length = 407
Score = 54.8 bits (126), Expect = 8e-07
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
MAKSKNHT HNQ+RK HRNGIKKPR R+
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRY 29
>UniRef50_P47914 Cluster: 60S ribosomal protein L29; n=251;
Eukaryota|Rep: 60S ribosomal protein L29 - Homo sapiens
(Human)
Length = 159
Score = 54.8 bits (126), Expect = 8e-07
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
MAKSKNHT HNQ+RK HRNGIKKPR R+
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRY 29
>UniRef50_UPI0000F2CE67 Cluster: PREDICTED: similar to ribosomal
protein L29/cell surface heparin binding protein HIP;
n=4; Monodelphis domestica|Rep: PREDICTED: similar to
ribosomal protein L29/cell surface heparin binding
protein HIP - Monodelphis domestica
Length = 252
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
MAKSKNHT HNQ+RK HRNGIKKPR ++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSLKY 29
>UniRef50_Q7QPW0 Cluster: GLP_433_2266_2454; n=2; Eukaryota|Rep:
GLP_433_2266_2454 - Giardia lamblia ATCC 50803
Length = 62
Score = 50.8 bits (116), Expect = 1e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
MAK KNHT+ NQNRK HRNGIKKP+K+ +
Sbjct: 1 MAKLKNHTSKNQNRKDHRNGIKKPKKSAY 29
>UniRef50_Q4PEG3 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 282
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +3
Query: 165 KMAKSKNHTNHNQNRKAHRNGIKKPRKTRHXPPL 266
+MAKSKN + HNQ RKAHRNGIKKP KT P L
Sbjct: 93 RMAKSKNSSQHNQVRKAHRNGIKKP-KTNKYPSL 125
>UniRef50_Q4Q178 Cluster: Ribosomal protein L29, putative; n=7;
Trypanosomatidae|Rep: Ribosomal protein L29, putative -
Leishmania major
Length = 70
Score = 48.0 bits (109), Expect = 9e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKP 239
MAKSKNHTNHNQ+ K HRNGIK P
Sbjct: 1 MAKSKNHTNHNQSSKNHRNGIKGP 24
>UniRef50_Q5KDL6 Cluster: Ribosomal protein L29.e, cytosolic,
putative; n=1; Filobasidiella neoformans|Rep: Ribosomal
protein L29.e, cytosolic, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 99
Score = 48.0 bits (109), Expect = 9e-05
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
MAKSKNHT HNQ RKAHRN I++P+ ++
Sbjct: 1 MAKSKNHTAHNQTRKAHRNKIQRPKTNKY 29
>UniRef50_Q9NAG9 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 87
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 174 KSKNHTNHNQNRKAHRNGIKKPRK 245
K +NHTNHN+N KAHRNGI KP+K
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKK 37
>UniRef50_Q54TW3 Cluster: Ribosomal protein L29; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L29 -
Dictyostelium discoideum AX4
Length = 93
Score = 44.8 bits (101), Expect = 8e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKK 236
MAKSKNH+ H++NRK HRNGIKK
Sbjct: 1 MAKSKNHSTHHKNRKDHRNGIKK 23
>UniRef50_A5HW97 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 167
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 174 KSKNHTNHNQNRKAHRNGIKKPR 242
KSKNHTNHNQN AHR GI KP+
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKPK 102
>UniRef50_UPI0001552995 Cluster: PREDICTED: similar to ribosomal
protein; n=2; Mus musculus|Rep: PREDICTED: similar to
ribosomal protein - Mus musculus
Length = 244
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 171 AKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
AKSKNH HNQ+ K +RNGIKKPR ++
Sbjct: 47 AKSKNHITHNQSCKWYRNGIKKPRSPKN 74
>UniRef50_UPI000049A0F8 Cluster: 60S ribosomal protein L29; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L29 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 43.2 bits (97), Expect = 0.003
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
M+K KN ++HNQ+ KAHRNG KP+K+ +
Sbjct: 1 MSKDKNRSSHNQSHKAHRNGFYKPKKSAY 29
>UniRef50_A0CDP3 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 73
Score = 42.7 bits (96), Expect = 0.003
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHXPPLAWXQXF*GXKGFARRVT*SQPSNSRGR 347
MAKSKN T+H+ RK HRNGIKK R+ Q F + FA + + PS + +
Sbjct: 1 MAKSKNATSHHNARKHHRNGIKKLPNQRYRTLKGCNQRFAKNRRFAIK---NDPSIKKNK 57
Query: 348 -LREKLPEKQRPRNEH 392
+ +L +++ +N H
Sbjct: 58 SVETRLAKRKANKNIH 73
>UniRef50_UPI00001CA5CB Cluster: PREDICTED: similar to 60S ribosomal
protein L29 (P23); n=2; Rattus norvegicus|Rep:
PREDICTED: similar to 60S ribosomal protein L29 (P23) -
Rattus norvegicus
Length = 105
Score = 42.3 bits (95), Expect = 0.004
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 177 SKNHTNHNQNRKAHRNGIKKPRKTRH 254
SKNHT HNQ K HRNGIKKP R+
Sbjct: 5 SKNHTTHNQFHKWHRNGIKKPWSQRY 30
>UniRef50_UPI0000DC0BB6 Cluster: UPI0000DC0BB6 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0BB6 UniRef100 entry -
Rattus norvegicus
Length = 142
Score = 40.3 bits (90), Expect = 0.018
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 168 MAKSKNHTNHNQNRKAHRNGIKKPR 242
MAKSKNHT H Q++K HRN IKKP+
Sbjct: 17 MAKSKNHTTH-QSQKWHRNSIKKPK 40
>UniRef50_A6R574 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 176
Score = 39.9 bits (89), Expect = 0.024
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 186 HTNHNQNRKAHRNGIKKPRKTRHXPPL 266
H+ H NRKAHRNGIKKP KT P L
Sbjct: 118 HSQHTLNRKAHRNGIKKP-KTHRYPSL 143
>UniRef50_UPI0000D9C65B Cluster: PREDICTED: similar to 60S ribosomal
protein L29 (Cell surface heparin-binding protein HIP);
n=1; Macaca mulatta|Rep: PREDICTED: similar to 60S
ribosomal protein L29 (Cell surface heparin-binding
protein HIP) - Macaca mulatta
Length = 237
Score = 34.7 bits (76), Expect = 0.89
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 162 IKMAKSKNHTNHNQNRKAHRNGIKKPRKTRH 254
++ S + T HNQ+RK +RNGIKK + +R+
Sbjct: 26 VQTCPSPHTTTHNQSRKWNRNGIKKSQSSRY 56
>UniRef50_A7RHN0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 446
Score = 32.3 bits (70), Expect = 4.7
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -1
Query: 341 SRVAWLASGYPSCKTFXSLKXLXPCQGWXVPGLPWLFDTISVSFAVLVMIC 189
S + W+ S K + P W +PGLP+++ IS+ ++++IC
Sbjct: 166 SSIVWVVSALLDKKWSTNPSLADPAGAW-IPGLPFIYSCISLLGGLMLLIC 215
>UniRef50_Q54KV8 Cluster: HMG1/2 (High mobility group)
box-containing protein; n=1; Dictyostelium discoideum
AX4|Rep: HMG1/2 (High mobility group) box-containing
protein - Dictyostelium discoideum AX4
Length = 350
Score = 31.9 bits (69), Expect = 6.3
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 153 ENSIKMAKSKNHTNHNQ-NRKAHRNGIKKPRKTRHXPPL 266
E IK ++NH +HN N AH +G+K+ + + P L
Sbjct: 57 EKEIKKKSTENHESHNDHNGGAHHSGVKRSKPLQPFPAL 95
>UniRef50_A5NGQ9 Cluster: Putative uncharacterized protein; n=4;
Shewanella baltica|Rep: Putative uncharacterized protein
- Shewanella baltica OS223
Length = 1164
Score = 31.5 bits (68), Expect = 8.3
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 139 PFTGLKTPSKWQSQRIIQIITKT-AK-LTEMVSKSQGRPGT 255
PFT TP+ Q QR++Q++ +T AK LT+ SKS +P +
Sbjct: 372 PFTIALTPNAAQQQRLMQLLDETLAKPLTQPPSKSAAKPAS 412
>UniRef50_Q7F1T9 Cluster: Putative uncharacterized protein
OJ1167_G06.119; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1167_G06.119 - Oryza sativa subsp. japonica (Rice)
Length = 270
Score = 31.5 bits (68), Expect = 8.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 192 NHNQNRKAHRNGIKKPRKTRHXPP 263
NH + R+ HR+ +++P RH PP
Sbjct: 42 NHGRRRRCHRHRLRRPPLRRHPPP 65
>UniRef50_Q4Y8Z0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 59
Score = 31.5 bits (68), Expect = 8.3
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 204 NRKAHRNGIKKPR 242
NRKAHRNGIKKP+
Sbjct: 1 NRKAHRNGIKKPK 13
Score = 31.5 bits (68), Expect = 8.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 239 KEDQAXSTLGMXPXFLRXQRFCKKGNLKPAKQL 337
K + S G+ P F R Q++C KG +K K+L
Sbjct: 13 KSHKFMSRKGLDPKFFRNQKYCLKGMIKKQKEL 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,363,108
Number of Sequences: 1657284
Number of extensions: 4906608
Number of successful extensions: 13760
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13714
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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