Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30745.Seq
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IEC4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  

>UniRef50_Q0IEC4 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 116

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +1

Query: 100 CLIRFTPIVFDSIFQYHKNYM*XCXTRIKKVYYYLE*IIA*NSCPSSLTIPSVKRFVNHS 279
           C ++  P  F    Q  KN    C  R K+  + L        CP+     + K+FVN S
Sbjct: 28  CTVKSEPAAFSGAKQAPKNRRIKCF-RCKQEGHKLA------ECPAKKKEDAKKKFVNKS 80

Query: 280 DSHVSDAGKVC 312
            +HV+D  +VC
Sbjct: 81  KAHVADQSEVC 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,395,241
Number of Sequences: 1657284
Number of extensions: 9955547
Number of successful extensions: 18012
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 17555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18007
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)