Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30735.Seq
(618 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 105 8e-22
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 105 1e-21
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 104 2e-21
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 92 1e-17
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 88 2e-16
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 84 2e-15
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 82 9e-15
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 81 2e-14
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 72 1e-11
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 66 5e-10
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 65 1e-09
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 63 4e-09
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 60 5e-08
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 58 1e-07
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 52 1e-05
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 48 2e-04
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 48 2e-04
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 47 3e-04
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 38 0.14
UniRef50_A5AZZ3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q9XTU8 Cluster: Putative uncharacterized protein; n=2; ... 33 7.2
UniRef50_Q60033 Cluster: Endo-1,4-beta-glucanase precursor; n=4;... 32 9.5
UniRef50_A7RWZ6 Cluster: Predicted protein; n=1; Nematostella ve... 32 9.5
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 105 bits (252), Expect = 8e-22
Identities = 64/148 (43%), Positives = 75/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQM-RHR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ K GTAQSVGC V+G+
Sbjct: 120 SLA-RELSGTIKEILGTAQSVGCNVDGR 146
Score = 91.9 bits (218), Expect = 1e-17
Identities = 54/100 (54%), Positives = 66/100 (66%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN +
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN-IKHSGNITFDEIV 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+ R MR+R + R SG++KEIL T + C GRH
Sbjct: 111 NIARQMRHR-SLARELSGTIKEIL--GTAQSVGCNVDGRH 147
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 105 bits (251), Expect = 1e-21
Identities = 64/148 (43%), Positives = 75/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQM-RHR 151
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ K GTAQSVGC V+G+
Sbjct: 152 SLA-RELSGTIKEILGTAQSVGCNVDGR 178
Score = 92.7 bits (220), Expect = 6e-18
Identities = 54/100 (54%), Positives = 68/100 (68%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN ++
Sbjct: 84 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 143
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+R+ MR+R + R SG++KEIL T + C GRH
Sbjct: 144 IVRQ-MRHR-SLARELSGTIKEIL--GTAQSVGCNVDGRH 179
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 104 bits (249), Expect = 2e-21
Identities = 64/148 (43%), Positives = 76/148 (51%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGP GLSPKK+GDDIAKAT + +
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVM-RPR 261
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
SM K GTAQSVGCTV+G+
Sbjct: 262 SMA-RELKGTCKEVLGTAQSVGCTVDGK 288
Score = 88.2 bits (209), Expect = 1e-16
Identities = 53/100 (53%), Positives = 64/100 (64%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGLKITV LT+QNRQA I+VVPSAA LII ALKEPPR+RKKQKN + +
Sbjct: 194 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKN-IKHSGNIGFEDIL 252
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
A+ R MR R + R G+ KE+L T + C G+H
Sbjct: 253 AIARVMRPR-SMARELKGTCKEVL--GTAQSVGCTVDGKH 289
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 91.9 bits (218), Expect = 1e-17
Identities = 55/149 (36%), Positives = 78/149 (52%)
Frame = +1
Query: 100 KMPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSL 279
KMPPKFDPN+ V +R VGGEV AT+SL PK+GP GL+ KK+G+DIAK+T+ + +
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 280 CS*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ET 459
C + K + K K KH GNI + ++S
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKES-AP 173
Query: 460 DSMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
+SMG + + GTA S+GCT++G+
Sbjct: 174 NSMG-ASMKSVVMEVLGTAVSIGCTIDGE 201
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 87.8 bits (208), Expect = 2e-16
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKAT 252
MPPKFDPNE+K+++LR GGEVGA S+L PKIGP GLSPKK+G+DIAK T
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNT 50
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = +3
Query: 261 KGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYRAL 440
KGL++TV+LT+QNRQA ++VVPSA+ L+I ALKEPPR+RKK+KN + PL +
Sbjct: 78 KGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEKN-IKHNKSIPLDDIIEI 136
Query: 441 RRFMRNRFNGPRYFSGSVKEIL 506
R MR+R + + G+V EIL
Sbjct: 137 ARTMRSR-SLAKELKGTVLEIL 157
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXT-PREHXPLKMY 431
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN + P PL+
Sbjct: 145 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNSESAPLPGFPLQCA 204
Query: 432 RALRR 446
L R
Sbjct: 205 TQLCR 209
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 139 VNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKAT 252
V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 143
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 82.2 bits (194), Expect = 9e-15
Identities = 50/148 (33%), Positives = 74/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPK DPNE++++N++ GGE G S+L PK+GP GL+PK+VGD I + + R +
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + + K K KH GN+ + I + E
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVI-KVARAVEEK 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ TF K+ GTAQS+G TV+GQ
Sbjct: 120 SLAK-TFTGTVKQVLGTAQSLGATVDGQ 146
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = +1
Query: 100 KMPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKAT 252
KMPPKFDPN + +R GGEVGA SSL PKIGP GLSPKKVG+DIAK T
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKET 112
Score = 76.2 bits (179), Expect = 6e-13
Identities = 42/85 (49%), Positives = 60/85 (70%)
Frame = +3
Query: 252 KDWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMY 431
KDWKGL++TV+LTVQNRQA+++VVP+A+ L+I ALKEP ++RKK K T + L
Sbjct: 114 KDWKGLRVTVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKG-ITHTGNCSLDDI 172
Query: 432 RALRRFMRNRFNGPRYFSGSVKEIL 506
+ R MR + + + +G+VKEIL
Sbjct: 173 IEVARVMRPK-SCAKNLAGTVKEIL 196
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = +3
Query: 252 KDWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMY 431
+ WKGLKI V+LT+QNRQA+I VVP++A +++ L E PR+RKK KN + ++
Sbjct: 63 QSWKGLKICVKLTIQNRQAKIEVVPTSASMVLKELNEAPRDRKKVKN-IKHNGNLKIEQV 121
Query: 432 RALRRFMRNRFNGPRYFSGSVKEIL 506
++ R M+ + + + F G+VKEIL
Sbjct: 122 YSIARAMKEK-SRAKEFRGTVKEIL 145
Score = 69.3 bits (162), Expect = 7e-11
Identities = 46/139 (33%), Positives = 62/139 (44%)
Frame = +1
Query: 139 VNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLCS*QFKTDKXXXX 318
V +R VGGEVGA+S L PK+GP GLSPKK+GDDIAK T++ + + + +
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 319 XXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETDSMGPGTFLAQ*K 498
+ K K KH GN+ + E F K
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAMKEKSR--AKEFRGTVK 142
Query: 499 RFFGTAQSVGCTVEGQAAT 555
GT S+GCTV+G+ T
Sbjct: 143 EILGTCNSIGCTVDGKKPT 161
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 66.5 bits (155), Expect = 5e-10
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
D+K LK+ VQL +++R+A + V PS A LII +LKEPPR+RKK+KN + L+M
Sbjct: 52 DYKSLKVHVQLAIKDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNIL---HNGSLRMTE 108
Query: 435 A--LRRFMRNRFNGPRYFSGSVKEIL 506
+ R R+ + SG+VKE+L
Sbjct: 109 VVDIARIARSSRSYSNSLSGTVKEVL 134
Score = 47.2 bits (107), Expect = 3e-04
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 1/144 (0%)
Frame = +1
Query: 118 DPNEIKIVNLRCVGGEV-GATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLCS*QF 294
DP + K + L+ VGGEV GAT L ++GP GLS K VG+DI KAT + +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 295 KTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETDSMGP 474
K K + K K H G++ + + + S
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYS- 123
Query: 475 GTFLAQ*KRFFGTAQSVGCTVEGQ 546
+ K GT +S+GC V+G+
Sbjct: 124 NSLSGTVKEVLGTCKSIGCKVDGK 147
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/46 (67%), Positives = 34/46 (73%)
Frame = -2
Query: 254 LVALAMSSPTFXGDRPXGPILGPKDDVAPTSPPTHRKFTILISFGS 117
LVALA+SSPTF GD+P GPI G K APTSPPT K+ L SFGS
Sbjct: 54 LVALAISSPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99
Score = 42.3 bits (95), Expect = 0.009
Identities = 24/57 (42%), Positives = 28/57 (49%)
Frame = -3
Query: 391 FFCFLRSRGGSLRAXMIRXAAEGTTAIWACLF*TVSCTVILRPFQSLWPWQCHHPPF 221
F F S GGS +A M + A+GTT ACLF + TV L P SL P F
Sbjct: 8 FLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAISSPTF 64
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +1
Query: 136 IVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRT 258
IV +R VGGEVGA+S L PK+GP GLSPKK+GDDIAK T++
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQS 73
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 63.3 bits (147), Expect = 4e-09
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGL 213
MPPKF+ NEI+ V LRC GGEVGAT+SL PKIGP GL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 59.7 bits (138), Expect = 5e-08
Identities = 40/90 (44%), Positives = 53/90 (58%)
Frame = +3
Query: 285 LTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYRALRRFMRNRF 464
L+ + QAQI VVPSA+ LII ALKEP R+RKKQKN ++ R+ MR+R
Sbjct: 165 LSPKKGQAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQ-MRHR- 222
Query: 465 NGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+ R SG++KE+L T + C GRH
Sbjct: 223 SLDRELSGTIKELL--GTAQSLGCNVDGRH 250
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = +1
Query: 109 PKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKK 225
PKF P EIK+ LRC G EV A S+L PKI P GLSPKK
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPKK 169
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATR 255
MPP+ DPN ++ LR GG + A ++LGPKIGP GL PK VG+ I +AT+
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQ 51
Score = 41.1 bits (92), Expect = 0.021
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +3
Query: 258 WKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPR 371
+KG+++ V++ +NRQ ++VVP+A+ L++ AL E PR
Sbjct: 53 YKGIRVKVRIVSKNRQPTVSVVPTASSLLVKALGEGPR 90
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 133 KIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATR 255
K+V ++ GG+V + S L KIGP GLSPKK+G+D AK T+
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTK 47
Score = 33.1 bits (72), Expect = 5.5
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 252 KDWKGLKITVQLTVQNRQAQIAVVPSAAXLI 344
K+W G+ +T++LT+ + A + +VPS + L+
Sbjct: 48 KNWDGIIVTIKLTIIKKNAYLKIVPSVSSLL 78
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 47.6 bits (108), Expect = 2e-04
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = -3
Query: 247 PWQCHHPPFXETDXEDRF*GPKMMWHRL 164
PWQCHH PF ETD R GP WHRL
Sbjct: 91 PWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = -1
Query: 249 GLGNVITHLFXRQTXRTDFRAQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 97
GLG++ T+L QT T+ +Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 132 GLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -1
Query: 246 LGNVITHLFXRQTXRTDFRAQR*CGTDFPADTSQIHDFNFIWVKLRGH 103
LG+VI HLF RQT + Q GTD P Q+HDF+ + V+L H
Sbjct: 102 LGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLVGVELGWH 149
Score = 32.3 bits (70), Expect = 9.5
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = -2
Query: 509 PKNLFY*ARKVPGPIESVSHESSQCPIHLQGXMFPWCXXIXXXXXXXXXXLKGSDDKXCC 330
P++LF +R+ G V H SS ++G + + L+G DD+
Sbjct: 16 PQDLFNGSREFSGQ-RLVLHLSSNVDNLIKGDVST-VLYVFLLLSVSWWFLEGFDDQGRG 73
Query: 329 RGNNSYLGLSVLNCQLHSDLETLPVLVAL 243
R + L LSVL+ Q HSD +TLP+ L
Sbjct: 74 RRYHLNLSLSVLDRQFHSDPQTLPITSCL 102
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 38.3 bits (85), Expect = 0.14
Identities = 28/68 (41%), Positives = 36/68 (52%)
Frame = +3
Query: 351 ALKEPPRERKKQKNXXTPREHXPLKMYRALRRFMRNRFNGPRYFSGSVKEILWHSTVSWM 530
A KEPPR+RKKQKN + + R MR+R + R SG++KEIL T +
Sbjct: 174 AKKEPPRDRKKQKN-IKHSGNITFDEIVNIARQMRHR-SLARELSGTIKEIL--GTAQSV 229
Query: 531 YCGRAGRH 554
C GRH
Sbjct: 230 GCNVDGRH 237
>UniRef50_A5AZZ3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 438
Score = 32.7 bits (71), Expect = 7.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 437 IAKIHEKQIQWAPVLFWLSKRDSLAQHSQLDVLWKGRPPHDLID 568
+A + + W P+L WL K++ + S L W R HD ++
Sbjct: 250 LAPVSGEDDSWIPILEWLDKQEKASVLSGLPFFWALRKRHDSVE 293
>UniRef50_Q9XTU8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 436
Score = 32.7 bits (71), Expect = 7.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 117 KLRGHFVDYLVQLYTIITLNPNGWVWIPQGYRLNVQR 7
K R +D L +L TI GWVW+ G + NVQR
Sbjct: 305 KCRKQKIDMLNELATIFKKRSFGWVWMEGGAQENVQR 341
>UniRef50_Q60033 Cluster: Endo-1,4-beta-glucanase precursor; n=4;
Thermotoga|Rep: Endo-1,4-beta-glucanase precursor -
Thermotoga maritima
Length = 274
Score = 32.3 bits (70), Expect = 9.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 123 WVKLRGHFVDYLVQLYTIITLNPNGWV 43
W+K G V++ LY I+ NP+ WV
Sbjct: 54 WLKFDGEKVEFYADLYNIVLQNPDSWV 80
>UniRef50_A7RWZ6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 4477
Score = 32.3 bits (70), Expect = 9.5
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = -2
Query: 350 SDDKXCCRGNNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTFXGDRPXGPILGPKDDVA 171
SD+K C R LS L ++ TL L S TF +P GP+ G K DVA
Sbjct: 885 SDEKRCIRAF-----LSSLRNPSDDEVLTLMALPIFEAISGTFTAVQPDGPLRGEKLDVA 939
Query: 170 P 168
P
Sbjct: 940 P 940
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,035,632
Number of Sequences: 1657284
Number of extensions: 12115951
Number of successful extensions: 29501
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 28492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29477
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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