Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30735.Seq
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    26   0.29 
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   1.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.3  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = -2

Query: 320 NSYL-GLSVL-NCQL--HSDLETLPVLVALAMSSPTFXGDRPXGPILGPKDDVAPTSPPT 153
           NSYL  LS+  N QL  H      PV +      P+    +   PIL  K  V+PT+PPT
Sbjct: 44  NSYLFSLSLAQNNQLFTHHKAPIRPVALPPKREIPS---PKRSSPILAEKVSVSPTTPPT 100


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 445 LRNARYIFKGXCSLG 401
           LR ARY  KG C +G
Sbjct: 67  LRKARYTEKGTCKMG 81


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 498 EILWHSTVSWMYCGRA 545
           EI W STVSW Y G A
Sbjct: 110 EIGWASTVSW-YAGDA 124


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 498 EILWHSTVSWMYCGRA 545
           EI W STVSW Y G A
Sbjct: 110 EIGWASTVSW-YAGDA 124


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 248  PQGLEGSQDHCAADSSKQTSPD 313
            P GL  ++DHC    + +  PD
Sbjct: 2266 PNGLFWNKDHCDWPENTECHPD 2287


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 122 QMKLKS*ICDVSAGKSVPHHLWALK 196
           Q  ++  +C++S    +P H+W  K
Sbjct: 273 QFNIEMFLCNMSLLTVIPIHVWTSK 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,750
Number of Sequences: 336
Number of extensions: 3208
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)