Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30735.Seq
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 105 1e-22
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 105 1e-22
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 105 1e-22
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 105 1e-22
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 105 1e-22
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 105 2e-22
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 99 1e-20
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 72 1e-12
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 48 4e-05
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 48 4e-05
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 45 2e-04
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 29 9.9
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 29 9.9
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 29 9.9
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 29 9.9
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 105 bits (252), Expect = 1e-22
Identities = 64/148 (43%), Positives = 75/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQM-RHR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ K GTAQSVGC V+G+
Sbjct: 120 SLA-RELSGTIKEILGTAQSVGCNVDGR 146
Score = 91.9 bits (218), Expect = 2e-18
Identities = 54/100 (54%), Positives = 66/100 (66%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN +
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN-IKHSGNITFDEIV 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+ R MR+R + R SG++KEIL T + C GRH
Sbjct: 111 NIARQMRHR-SLARELSGTIKEIL--GTAQSVGCNVDGRH 147
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 105 bits (252), Expect = 1e-22
Identities = 64/148 (43%), Positives = 75/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQM-RHR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ K GTAQSVGC V+G+
Sbjct: 120 SLA-RELSGTIKEILGTAQSVGCNVDGR 146
Score = 91.9 bits (218), Expect = 2e-18
Identities = 54/100 (54%), Positives = 66/100 (66%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN +
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN-IKHSGNITFDEIV 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+ R MR+R + R SG++KEIL T + C GRH
Sbjct: 111 NIARQMRHR-SLARELSGTIKEIL--GTAQSVGCNVDGRH 147
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 105 bits (252), Expect = 1e-22
Identities = 64/148 (43%), Positives = 75/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQM-RHR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ K GTAQSVGC V+G+
Sbjct: 120 SLA-RELSGTIKEILGTAQSVGCNVDGR 146
Score = 91.9 bits (218), Expect = 2e-18
Identities = 54/100 (54%), Positives = 66/100 (66%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN +
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN-IKHSGNITFDEIV 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+ R MR+R + R SG++KEIL T + C GRH
Sbjct: 111 NIARQMRHR-SLARELSGTIKEIL--GTAQSVGCNVDGRH 147
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 105 bits (252), Expect = 1e-22
Identities = 64/148 (43%), Positives = 75/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQM-RHR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ K GTAQSVGC V+G+
Sbjct: 120 SLA-RELSGTIKEILGTAQSVGCNVDGR 146
Score = 91.9 bits (218), Expect = 2e-18
Identities = 54/100 (54%), Positives = 66/100 (66%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN +
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN-IKHSGNITFDEIV 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+ R MR+R + R SG++KEIL T + C GRH
Sbjct: 111 NIARQMRHR-SLARELSGTIKEIL--GTAQSVGCNVDGRH 147
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 105 bits (252), Expect = 1e-22
Identities = 64/148 (43%), Positives = 75/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQM-RHR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ K GTAQSVGC V+G+
Sbjct: 120 SLA-RELSGTIKEILGTAQSVGCNVDGR 146
Score = 91.9 bits (218), Expect = 2e-18
Identities = 54/100 (54%), Positives = 66/100 (66%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN +
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN-IKHSGNITFDEIV 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+ R MR+R + R SG++KEIL T + C GRH
Sbjct: 111 NIARQMRHR-SLARELSGTIKEIL--GTAQSVGCNVDGRH 147
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 105 bits (251), Expect = 2e-22
Identities = 64/148 (43%), Positives = 75/148 (50%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQM-RHR 151
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
S+ K GTAQSVGC V+G+
Sbjct: 152 SLA-RELSGTIKEILGTAQSVGCNVDGR 178
Score = 92.7 bits (220), Expect = 9e-19
Identities = 54/100 (54%), Positives = 68/100 (68%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT+QNRQAQI VVPSA+ LII ALKEPPR+RKKQKN ++
Sbjct: 84 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 143
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+R+ MR+R + R SG++KEIL T + C GRH
Sbjct: 144 IVRQ-MRHR-SLARELSGTIKEIL--GTAQSVGCNVDGRH 179
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 99.1 bits (236), Expect = 1e-20
Identities = 62/147 (42%), Positives = 73/147 (49%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDPNEIK+V LRC GEVGATS+L PKIGP GLSPKKVGDDIAKAT + R
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 KLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQM-RHR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEG 543
S+ K GTAQS+GC V+G
Sbjct: 120 SLA-RELSGTIKEIPGTAQSMGCNVDG 145
Score = 83.8 bits (198), Expect = 4e-16
Identities = 50/100 (50%), Positives = 63/100 (63%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGL+ITV+LT++NRQAQI VVPSA+ II ALK+PPR+RKKQKN +
Sbjct: 52 DWKGLRITVKLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKN-IKHNGNITFDEIV 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
+ R MR+R + R SG++KEI T M C G H
Sbjct: 111 NIARQMRHR-SLARELSGTIKEI--PGTAQSMGCNVDGHH 147
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 72.1 bits (169), Expect = 1e-12
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGL 213
MPPKFDPNEIK+V LRC GGEVGATS+L PKIGP GL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
Score = 55.6 bits (128), Expect = 1e-07
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +3
Query: 312 IAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYRALRRFMRNRFNGPRYFSGS 491
I VVPSA+ LII ALKEPPR+RKKQKN + + R MR+R + R SG+
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKN-IKHSGNITFDEIVNIARQMRHR-SLARELSGT 95
Query: 492 VKEILWHSTVSWMYCGRAGRH 554
+KEIL T + C GRH
Sbjct: 96 IKEIL--GTAQSVGCNVDGRH 114
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 47.6 bits (108), Expect = 4e-05
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = -3
Query: 247 PWQCHHPPFXETDXEDRF*GPKMMWHRL 164
PWQCHH PF ETD R GP WHRL
Sbjct: 91 PWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 47.6 bits (108), Expect = 4e-05
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = -3
Query: 247 PWQCHHPPFXETDXEDRF*GPKMMWHRL 164
PWQCHH PF ETD R GP WHRL
Sbjct: 91 PWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/28 (60%), Positives = 17/28 (60%)
Frame = -3
Query: 247 PWQCHHPPFXETDXEDRF*GPKMMWHRL 164
PWQCHH PF TD R GP WHRL
Sbjct: 91 PWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator
suppressor-of-white-apricot mRNA, complete cds. ).
Length = 951
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 345 IXALKEPPRERKKQKNXXTPREHXPLKMYRALRRFMRNRFNGPRYFSGSVKEILWHS 515
+ L+ P +R K+ PRE K + ++ R R P+Y S S HS
Sbjct: 730 LPTLEVKPPDRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHS 786
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.5 bits (63), Expect = 9.9
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +1
Query: 121 PNEIKIVNLRCVGGEVGATSSLGPKIGPXGL----SPKKVGDDIAKA--TRTGRVSRS 276
P E+ + +C G E+G TS + P L +PK+VGD IA + T +G RS
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIALSDITSSGAADRS 263
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.5 bits (63), Expect = 9.9
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +1
Query: 121 PNEIKIVNLRCVGGEVGATSSLGPKIGPXGL----SPKKVGDDIAKA--TRTGRVSRS 276
P E+ + +C G E+G TS + P L +PK+VGD IA + T +G RS
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIALSDITSSGAADRS 256
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.5 bits (63), Expect = 9.9
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +1
Query: 121 PNEIKIVNLRCVGGEVGATSSLGPKIGPXGL----SPKKVGDDIAKA--TRTGRVSRS 276
P E+ + +C G E+G TS + P L +PK+VGD IA + T +G RS
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIALSDITSSGAADRS 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,252,472
Number of Sequences: 237096
Number of extensions: 2016614
Number of successful extensions: 7610
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7601
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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