BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30735.Seq
(618 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022527-1|AAY54943.1| 307|Drosophila melanogaster IP07888p pro... 104 1e-22
AY071246-1|AAL48868.1| 165|Drosophila melanogaster RE28824p pro... 104 1e-22
AE013599-3797|AAF47152.1| 165|Drosophila melanogaster CG3195-PC... 104 1e-22
AE013599-3796|AAM68299.1| 165|Drosophila melanogaster CG3195-PB... 104 1e-22
AE013599-3795|AAM68298.1| 165|Drosophila melanogaster CG3195-PA... 104 1e-22
BT011350-1|AAR96142.1| 489|Drosophila melanogaster RH05790p pro... 28 8.8
AY119154-1|AAM51014.1| 380|Drosophila melanogaster RE65163p pro... 28 8.8
AE014134-2891|AAN11175.1| 475|Drosophila melanogaster CG5674-PC... 28 8.8
AE014134-2886|AAN11174.1| 489|Drosophila melanogaster CG5674-PA... 28 8.8
>BT022527-1|AAY54943.1| 307|Drosophila melanogaster IP07888p
protein.
Length = 307
Score = 104 bits (249), Expect = 1e-22
Identities = 64/148 (43%), Positives = 76/148 (51%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGP GLSPKK+GDDIAKAT + +
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVM-RPR 261
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
SM K GTAQSVGCTV+G+
Sbjct: 262 SMA-RELKGTCKEVLGTAQSVGCTVDGK 288
Score = 88.2 bits (209), Expect = 8e-18
Identities = 53/100 (53%), Positives = 64/100 (64%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGLKITV LT+QNRQA I+VVPSAA LII ALKEPPR+RKKQKN + +
Sbjct: 194 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKN-IKHSGNIGFEDIL 252
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
A+ R MR R + R G+ KE+L T + C G+H
Sbjct: 253 AIARVMRPR-SMARELKGTCKEVL--GTAQSVGCTVDGKH 289
>AY071246-1|AAL48868.1| 165|Drosophila melanogaster RE28824p
protein.
Length = 165
Score = 104 bits (249), Expect = 1e-22
Identities = 64/148 (43%), Positives = 76/148 (51%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGP GLSPKK+GDDIAKAT + +
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVM-RPR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
SM K GTAQSVGCTV+G+
Sbjct: 120 SMA-RELKGTCKEVLGTAQSVGCTVDGK 146
Score = 88.2 bits (209), Expect = 8e-18
Identities = 53/100 (53%), Positives = 64/100 (64%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGLKITV LT+QNRQA I+VVPSAA LII ALKEPPR+RKKQKN + +
Sbjct: 52 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKN-IKHSGNIGFEDIL 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
A+ R MR R + R G+ KE+L T + C G+H
Sbjct: 111 AIARVMRPR-SMARELKGTCKEVL--GTAQSVGCTVDGKH 147
>AE013599-3797|AAF47152.1| 165|Drosophila melanogaster CG3195-PC,
isoform C protein.
Length = 165
Score = 104 bits (249), Expect = 1e-22
Identities = 64/148 (43%), Positives = 76/148 (51%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGP GLSPKK+GDDIAKAT + +
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVM-RPR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
SM K GTAQSVGCTV+G+
Sbjct: 120 SMA-RELKGTCKEVLGTAQSVGCTVDGK 146
Score = 88.2 bits (209), Expect = 8e-18
Identities = 53/100 (53%), Positives = 64/100 (64%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGLKITV LT+QNRQA I+VVPSAA LII ALKEPPR+RKKQKN + +
Sbjct: 52 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKN-IKHSGNIGFEDIL 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
A+ R MR R + R G+ KE+L T + C G+H
Sbjct: 111 AIARVMRPR-SMARELKGTCKEVL--GTAQSVGCTVDGKH 147
>AE013599-3796|AAM68299.1| 165|Drosophila melanogaster CG3195-PB,
isoform B protein.
Length = 165
Score = 104 bits (249), Expect = 1e-22
Identities = 64/148 (43%), Positives = 76/148 (51%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGP GLSPKK+GDDIAKAT + +
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVM-RPR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
SM K GTAQSVGCTV+G+
Sbjct: 120 SMA-RELKGTCKEVLGTAQSVGCTVDGK 146
Score = 88.2 bits (209), Expect = 8e-18
Identities = 53/100 (53%), Positives = 64/100 (64%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGLKITV LT+QNRQA I+VVPSAA LII ALKEPPR+RKKQKN + +
Sbjct: 52 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKN-IKHSGNIGFEDIL 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
A+ R MR R + R G+ KE+L T + C G+H
Sbjct: 111 AIARVMRPR-SMARELKGTCKEVL--GTAQSVGCTVDGKH 147
>AE013599-3795|AAM68298.1| 165|Drosophila melanogaster CG3195-PA,
isoform A protein.
Length = 165
Score = 104 bits (249), Expect = 1e-22
Identities = 64/148 (43%), Positives = 76/148 (51%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLGPKIGPXGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDP E+K+V LRCVGGEVGATSSL PKIGP GLSPKK+GDDIAKAT + +
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60
Query: 283 S*QFKTDKXXXXXXXXXXXXXXXXXXXXXVNVKSRKIXKHQGNIXP*RCIGHCEDS*ETD 462
+ + + K +K KH GNI +
Sbjct: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVM-RPR 119
Query: 463 SMGPGTFLAQ*KRFFGTAQSVGCTVEGQ 546
SM K GTAQSVGCTV+G+
Sbjct: 120 SMA-RELKGTCKEVLGTAQSVGCTVDGK 146
Score = 88.2 bits (209), Expect = 8e-18
Identities = 53/100 (53%), Positives = 64/100 (64%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAXLIIXALKEPPRERKKQKNXXTPREHXPLKMYR 434
DWKGLKITV LT+QNRQA I+VVPSAA LII ALKEPPR+RKKQKN + +
Sbjct: 52 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKN-IKHSGNIGFEDIL 110
Query: 435 ALRRFMRNRFNGPRYFSGSVKEILWHSTVSWMYCGRAGRH 554
A+ R MR R + R G+ KE+L T + C G+H
Sbjct: 111 AIARVMRPR-SMARELKGTCKEVL--GTAQSVGCTVDGKH 147
>BT011350-1|AAR96142.1| 489|Drosophila melanogaster RH05790p
protein.
Length = 489
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = -2
Query: 347 DDKXCCRGNNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTFXGDRPXGPILGPKDDVAP 168
D K R N ++ L L ++ D + ++ P F P P++ P+ V+P
Sbjct: 153 DRKKARRANEAFRQLEKLRDKIRKDRKKGLLVTDPTQLPPEFAAMIPPVPVVKPEVGVSP 212
Query: 167 TSPPTHRKFT 138
PP ++ T
Sbjct: 213 APPPGQQQPT 222
>AY119154-1|AAM51014.1| 380|Drosophila melanogaster RE65163p
protein.
Length = 380
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = -2
Query: 347 DDKXCCRGNNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTFXGDRPXGPILGPKDDVAP 168
D K R N ++ L L ++ D + ++ P F P P++ P+ V+P
Sbjct: 44 DRKKARRANEAFRQLEKLRDKIRKDRKKGLLVTDPTQLPPEFAAMIPPVPVVKPEVGVSP 103
Query: 167 TSPPTHRKFT 138
PP ++ T
Sbjct: 104 APPPGQQQPT 113
>AE014134-2891|AAN11175.1| 475|Drosophila melanogaster CG5674-PC,
isoform C protein.
Length = 475
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = -2
Query: 347 DDKXCCRGNNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTFXGDRPXGPILGPKDDVAP 168
D K R N ++ L L ++ D + ++ P F P P++ P+ V+P
Sbjct: 139 DRKKARRANEAFRQLEKLRDKIRKDRKKGLLVTDPTQLPPEFAAMIPPVPVVKPEVGVSP 198
Query: 167 TSPPTHRKFT 138
PP ++ T
Sbjct: 199 APPPGQQQPT 208
>AE014134-2886|AAN11174.1| 489|Drosophila melanogaster CG5674-PA,
isoform A protein.
Length = 489
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = -2
Query: 347 DDKXCCRGNNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTFXGDRPXGPILGPKDDVAP 168
D K R N ++ L L ++ D + ++ P F P P++ P+ V+P
Sbjct: 153 DRKKARRANEAFRQLEKLRDKIRKDRKKGLLVTDPTQLPPEFAAMIPPVPVVKPEVGVSP 212
Query: 167 TSPPTHRKFT 138
PP ++ T
Sbjct: 213 APPPGQQQPT 222
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,648,813
Number of Sequences: 53049
Number of extensions: 581668
Number of successful extensions: 1291
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -