Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30734.Seq
(563 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 136 4e-31
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 128 7e-29
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 105 9e-22
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 104 1e-21
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 92 7e-18
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 87 3e-16
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 85 8e-16
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 81 2e-14
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 79 5e-14
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 77 4e-13
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 73 4e-12
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 63 5e-09
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 57 2e-07
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 53 5e-06
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 46 6e-04
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 44 0.002
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 44 0.002
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 42 0.008
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 40 0.030
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 40 0.030
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 38 0.16
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 38 0.21
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 36 0.65
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 36 0.65
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 36 0.86
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 36 0.86
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 35 1.5
UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; cor... 34 2.0
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 34 2.0
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 34 2.6
UniRef50_Q4QE75 Cluster: Putative uncharacterized protein; n=3; ... 33 3.5
UniRef50_Q5A0J6 Cluster: Likely glycerol-3-phosphate acyltransfe... 33 3.5
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 33 6.1
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 136 bits (328), Expect = 4e-31
Identities = 59/77 (76%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VDIRVTVKGGGHVAQVY 254
VDIRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 125 bits (302), Expect = 6e-28
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 128 bits (310), Expect = 7e-29
Identities = 59/81 (72%), Positives = 72/81 (88%)
Frame = +3
Query: 12 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 191
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 192 KFSMVDIRVTVKGGGHVAQVY 254
+F+ VDIR+ VKGGG+VAQ+Y
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIY 84
Score = 126 bits (303), Expect = 5e-28
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQAISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQK
Sbjct: 86 IRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQK 145
Query: 437 SYR 445
SYR
Sbjct: 146 SYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 105 bits (251), Expect = 9e-22
Identities = 45/76 (59%), Positives = 63/76 (82%)
Frame = +3
Query: 27 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 206
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 207 DIRVTVKGGGHVAQVY 254
DIRV V GGGHV+QVY
Sbjct: 64 DIRVRVTGGGHVSQVY 79
Score = 96.3 bits (229), Expect = 4e-19
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQAI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QK
Sbjct: 81 IRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQK 140
Query: 437 SYR 445
SYR
Sbjct: 141 SYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 104 bits (250), Expect = 1e-21
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQAI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQK
Sbjct: 93 IRQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQK 152
Query: 437 SYR 445
SYR
Sbjct: 153 SYR 155
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +3
Query: 165 EPILLLGKEKFSMVDIRVTVKGGGHVAQVY 254
EP+L++G +KF+ VDIRV V GGGH +QVY
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVY 91
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 92.3 bits (219), Expect = 7e-18
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = +2
Query: 227 GWWSCSTSLPIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 406
G + S IRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFG
Sbjct: 127 GGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFG 186
Query: 407 GPGARARYQKSYR 445
G GARAR QKSYR
Sbjct: 187 GHGARARRQKSYR 199
Score = 79.4 bits (187), Expect = 5e-14
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +3
Query: 33 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 200
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 87.0 bits (206), Expect = 3e-16
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
+R A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQK
Sbjct: 83 VRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQK 142
Query: 437 SYR 445
SYR
Sbjct: 143 SYR 145
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 85.4 bits (202), Expect = 8e-16
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = +2
Query: 227 GWWSCSTSLPIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 406
G S + RQAI+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 407 GPGARARYQKSYR 445
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 62.1 bits (144), Expect = 9e-09
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +3
Query: 27 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 204 VDIRVTVKGGGHVAQVY 254
+ I V V GGG V+Q Y
Sbjct: 69 LRIDVAVHGGGQVSQAY 85
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 81.0 bits (191), Expect = 2e-14
Identities = 49/145 (33%), Positives = 68/145 (46%)
Frame = +3
Query: 27 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 206
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 207 DIRVTVKGGGHVAQVYLSDKLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLTXXX 386
DI V VKG GHV Q+Y + + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 387 XXXXXXXXXXXXXDTRNLTVKPSRK 461
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
Score = 36.3 bits (80), Expect = 0.49
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQ 349
+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 95 VLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 79.4 bits (187), Expect = 5e-14
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +3
Query: 9 EARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK 188
E R V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 189 EKFSMVDIRVTVKGGGHVAQVY 254
F +D+ + V GGGHV+Q+Y
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIY 97
Score = 78.6 bits (185), Expect = 9e-14
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
+RQAIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QK
Sbjct: 99 VRQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQK 155
Query: 437 SYR 445
SYR
Sbjct: 156 SYR 158
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 76.6 bits (180), Expect = 4e-13
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = +2
Query: 221 SQGWWSCSTSLPIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 400
S+G S IRQ+ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 401 FGGPGARARYQKSYR 445
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
Score = 66.9 bits (156), Expect = 3e-10
Identities = 28/73 (38%), Positives = 47/73 (64%)
Frame = +3
Query: 36 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 215
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 216 VTVKGGGHVAQVY 254
+ KGGG V+Q+Y
Sbjct: 63 IFSKGGGKVSQIY 75
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 73.3 bits (172), Expect = 4e-12
Identities = 29/74 (39%), Positives = 53/74 (71%)
Frame = +3
Query: 27 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 206
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 207 DIRVTVKGGGHVAQ 248
DI V V+GGG + Q
Sbjct: 61 DIDVKVQGGGFMGQ 74
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 278 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 445
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 62.9 bits (146), Expect = 5e-09
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 200
P+Q+ QVFG KK A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 201 MVDIRVTVKGGGHVAQVY 254
V I V V G G VAQ+Y
Sbjct: 83 RVGIWVRVNGVGRVAQIY 100
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 227
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 228 GGGHVAQ 248
GGG + Q
Sbjct: 71 GGGVMGQ 77
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 9/72 (12%)
Frame = +2
Query: 257 IRQAISKALIAFYQ---------KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 409
+R AI++ L+ F++ + +D+ S+ +++ +++DR++LV DPRR EP+K+
Sbjct: 81 VRMAIARGLVEFFRCEESDDELCRMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMR 139
Query: 410 PGARARYQKSYR 445
AR R+QKSYR
Sbjct: 140 YSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 52.8 bits (121), Expect = 5e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 311 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 445
+ ++++++ + +D+ L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 105 KTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
Score = 42.3 bits (95), Expect = 0.008
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +3
Query: 45 FGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 224
F +K A+A Y +G G +R+N P +++ + + P+ + G + VDI V V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 225 KGGGHVAQ 248
KGGG + Q
Sbjct: 69 KGGGFMGQ 76
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 221
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 222 VKGGGHVAQ 248
V GGG AQ
Sbjct: 69 VLGGGFAAQ 77
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 18 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 110
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 44.0 bits (99), Expect = 0.002
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 224
GR+KT+ A G G + VNG P L+ L L++P++ G EK DI VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 225 KGGGHVAQ 248
KGGG Q
Sbjct: 69 KGGGFTGQ 76
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 224
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 225 KGGG 236
KGGG
Sbjct: 66 KGGG 69
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 42.3 bits (95), Expect = 0.008
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 36 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSMVD 209
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 210 IRVTVKGGG 236
+ V GGG
Sbjct: 65 FYIKVSGGG 73
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 40.3 bits (90), Expect = 0.030
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 224
GR+KTA A K G G L +NG+ L D + + ++ P L E F VD+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 225 KGGGHVAQ 248
GGG Q
Sbjct: 139 TGGGTTGQ 146
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 40.3 bits (90), Expect = 0.030
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 224
GR+KT++A + + G G + +NG PLD R + +++P++ L + S D+ TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 225 KGGGHVAQ 248
+GGG Q
Sbjct: 71 QGGGDSGQ 78
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 37.9 bits (84), Expect = 0.16
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 224
GR+K A G G + NGR L D +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 225 KGGGHVAQ 248
GGG Q
Sbjct: 120 GGGGPTGQ 127
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 37.5 bits (83), Expect = 0.21
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 224
GR+K + A + K+G G + VNGR +D + ++ P ++ + + D+R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 225 KGGGHVAQ 248
GGGH Q
Sbjct: 87 AGGGHTGQ 94
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 35.9 bits (79), Expect = 0.65
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 18 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 194
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 195 FSMVDIRVTVKGGGHVAQV 251
+ D+ + V GGG QV
Sbjct: 61 VNSFDLIIRVSGGGVQGQV 79
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 35.9 bits (79), Expect = 0.65
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 224
GR+K + A G G + +NGR LD L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 225 KGGGHVAQ 248
GGG Q
Sbjct: 68 DGGGFTGQ 75
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 35.5 bits (78), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 227
G++KT++AV + G G + VNG+ L PR L + L + ++ TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 228 GGGHVAQ 248
GGG Q
Sbjct: 254 GGGVTGQ 260
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 35.5 bits (78), Expect = 0.86
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPR-LLQYKLQEPILLLG-KEKFSMVDIRV 218
GR+KT+ A G+G +NG ++ ++ + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 219 TVKGGGHVAQV 251
VKGGG V QV
Sbjct: 77 KVKGGGLVGQV 87
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 34.7 bits (76), Expect = 1.5
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQY--KLQEPILLLGKEKFSMVDIRVT 221
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + DI V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 222 VKGGGHVAQ 248
+GGG Q
Sbjct: 75 AEGGGLTGQ 83
>UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; core
eudicotyledons|Rep: 30S ribosomal protein S9-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 34.3 bits (75), Expect = 2.0
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 227
GR+K + A + + G G +VN + D+ P +L ++ L + DI+ TVK
Sbjct: 23 GRRKCSIARVWIQPGEGKFQVNEKEFDVYFP-MLDHRAALLRPLAETKTLGRWDIKCTVK 81
Query: 228 GGGHVAQVYLSDKLFQRL*SPSTRNM*T 311
GGG + F R P +M T
Sbjct: 82 GGGTTGKTSPQSLRFLRRLVPKFSDMRT 109
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 34.3 bits (75), Expect = 2.0
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 12 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILL 179
ARR P+ + VF R ++ V K G G+ + G LD +P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 33.9 bits (74), Expect = 2.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 48 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 224
GR+K++ A Y + G G ++VN R D ++ L+ P++L D+ + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 225 KGGG 236
GGG
Sbjct: 74 YGGG 77
>UniRef50_Q4QE75 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 630
Score = 33.5 bits (73), Expect = 3.5
Identities = 16/73 (21%), Positives = 34/73 (46%)
Frame = +2
Query: 137 AQTAAVQTSGTYPFARQGKILYG*HQSDSQGWWSCSTSLPIRQAISKALIAFYQKYVDEA 316
A+ A++ +GT + +L + G+ S SLP+ A + +A+Y ++
Sbjct: 99 AERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQRV 158
Query: 317 SKKEIKDILVQYD 355
KE+ +++ D
Sbjct: 159 GGKEVPFVIMTSD 171
>UniRef50_Q5A0J6 Cluster: Likely glycerol-3-phosphate
acyltransferase Gpt2; n=5; Saccharomycetales|Rep: Likely
glycerol-3-phosphate acyltransferase Gpt2 - Candida
albicans (Yeast)
Length = 718
Score = 33.5 bits (73), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 251 LPIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLL 367
LP+ + + LI YQ+Y DE K+++D + Y+R+L+
Sbjct: 385 LPMVVEMDRRLIKGYQQYKDEPDVKKLRDAVYHYNRTLM 423
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 32.7 bits (71), Expect = 6.1
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 21 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKF 197
EP Q GR+K A A G G ++NGR L D ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELE-- 100
Query: 198 SMVDIRVTVKGGG 236
D+ + GGG
Sbjct: 101 GRYDVIARISGGG 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,728,622
Number of Sequences: 1657284
Number of extensions: 12259896
Number of successful extensions: 31528
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 30617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31516
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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