Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30733.Seq
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 159 2e-39
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 152 2e-37
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 55 7e-08
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 55 7e-08
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 48 6e-06
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 46 4e-05
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 46 4e-05
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 40 0.002
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 40 0.002
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 40 0.002
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 40 0.002
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 40 0.002
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 38 0.006
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 36 0.044
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 35 0.078
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 35 0.078
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 33 0.24
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 33 0.24
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 31 1.3
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 29 5.1
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 29 5.1
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 29 5.1
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 5.1
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 29 5.1
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 159 bits (387), Expect = 2e-39
Identities = 75/96 (78%), Positives = 80/96 (83%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG RKQL
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQL 218
Query: 690 AQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
AQIKEMVELPLRHP LFKAIGVKP GP GT
Sbjct: 219 AQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254
Score = 105 bits (253), Expect = 3e-23
Identities = 47/95 (49%), Positives = 67/95 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIF 157
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/63 (61%), Positives = 55/63 (87%)
Frame = +2
Query: 71 KSPDDLSTAIXRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+L+TAI + K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 251 TVA 259
TV+
Sbjct: 73 TVS 75
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 621 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
RE E N + DIGG + +++E+V+ P+ HP + G++P GP G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPG 526
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 159 bits (387), Expect = 2e-39
Identities = 75/96 (78%), Positives = 80/96 (83%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG RKQL
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQL 218
Query: 690 AQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
AQIKEMVELPLRHP LFKAIGVKP GP GT
Sbjct: 219 AQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254
Score = 105 bits (253), Expect = 3e-23
Identities = 47/95 (49%), Positives = 67/95 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIF 157
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/63 (61%), Positives = 55/63 (87%)
Frame = +2
Query: 71 KSPDDLSTAIXRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+L+TAI + K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 251 TVA 259
TV+
Sbjct: 73 TVS 75
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 621 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
RE E N + DIGG + +++E+V+ P+ HP + G++P GP G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPG 526
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 152 bits (369), Expect = 2e-37
Identities = 68/96 (70%), Positives = 80/96 (83%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
V+ MR VEFKVVET+P+P CIV+PDT+IH +G+PIKREEEEE++N +GYDD+GG RKQL
Sbjct: 160 VQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQL 219
Query: 690 AQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
AQIKEMVELPLRHP LFKAIG+KP GP GT
Sbjct: 220 AQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGT 255
Score = 118 bits (284), Expect = 5e-27
Identities = 48/95 (50%), Positives = 70/95 (73%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + + I++SD++CP+EK+RM DVVSI P P++ YG R+H+L
Sbjct: 64 ILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVL 123
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+LKPYF+EAYRP+H+ D F
Sbjct: 124 PIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIF 158
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +2
Query: 71 KSPDDLSTAIXRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+LSTAI + K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 251 TVA 259
+VA
Sbjct: 73 SVA 75
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 621 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
RE E N + DIGG + +++E+V+ P+ HP + G++P GP G
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPG 527
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGP 788
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ P GP
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 184
Query: 789 LGT 797
GT
Sbjct: 185 PGT 187
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGP 788
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ P GP
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 192
Query: 789 LGT 797
GT
Sbjct: 193 PGT 195
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ GP GT
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGT 204
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
V Y D+GGC+ Q+ +++E+VE PL HP + +G++P GP GT
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGT 222
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
+DDIGGC Q+ ++KE VELPL HP ++ +G+ G GT
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGT 228
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ GP GT
Sbjct: 153 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 199
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ GP GT
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 220
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +3
Query: 591 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAA 770
V+ D +P+ + E Y D+GG +Q+ +IKE VELPL HP ++ +G++P
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKG 224
Query: 771 FSCMGPLGT 797
G GT
Sbjct: 225 VILYGCPGT 233
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
+ Y DIGG Q +++E VELPL H L++ IG+ P GP G
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPG 205
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
Y DIGGC KQ+ ++ E V LP+ H F +G+ P GP GT
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGT 222
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
++VG+D +GG + +KE+V P+ +P +F+ + P GP GT
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGT 436
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
++VG+D +GG + +KE+V P+ +P +F+ + P GP GT
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGT 434
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
++VG+D +GG + +KE+V P+ +P +F+ + P GP GT
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGT 436
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
++VG+D +GG + +KE+V P+ +P +F+ + P GP GT
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGT 436
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
++VG+D +GG + +KE+V P+ +P +F+ + P GP GT
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGT 434
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
++VG+D +GG + +KE+V P+ +P +F+ + P GP GT
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGT 436
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
++VG+D +GG + +KE+V P+ +P +F+ + P GP GT
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGT 436
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
V ++DIGG + +I++ V P +HP F+ G+ P A GP G
Sbjct: 456 VSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPG 503
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 35.5 bits (78), Expect = 0.044
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 633 EEALNAVGY--DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
+E L+ G DD+ GC A ++E V LP +P+LFK + +P GP G
Sbjct: 167 DEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLR-QPVKGILLFGPPG 221
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
+D+IGGC + +A++K+ + LPLR S + + P GP G
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPG 124
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 657 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
+D+IGGC + +A++K+ + LPLR S + + P GP G
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPG 127
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 660 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
+D+GG +Q +++++ P ++P LF+++GV GP G
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSG 46
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 660 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
+D+GG +Q +++++ P ++P LF+++GV GP G
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSG 772
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 660 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLG 794
+D+GG +Q +++++ P ++P LF+++GV GP G
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSG 772
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +3
Query: 651 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
V + DI G +KE V LP++ P LF KP GP GT
Sbjct: 115 VKWTDIAGLEGAKEALKEAVILPIKFPQLFTG-NRKPWQGILLFGPPGT 162
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
N + DDI G + E V LPL P F+ + P A GP GT
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGT 237
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
N + DDI G + E V LPL P F+ + P A GP GT
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGT 237
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 552 TDPSPFCIVAPDTVIHCDGEPIKREEEEE--ALNAVGYD 662
++P+P VAP+ + E + E+EE A+ +GYD
Sbjct: 153 SNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYD 191
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 645 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPHAAFSCMGPLGT 797
N + DDI G + E V LPL P F+ + P A GP GT
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGT 237
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGV--KPHAAFSCM 782
+P + E + V +DDIG + Q++ + P++ F A+G+ +P C
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLC- 574
Query: 783 GPLG 794
GP G
Sbjct: 575 GPPG 578
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 85 IIRAFIICHFIQNLLLESKNYYNFY 11
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 609 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGV--KPHAAFSCM 782
+P + E + V +DDIG + Q++ + P++ F A+G+ +P C
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLC- 574
Query: 783 GPLG 794
GP G
Sbjct: 575 GPPG 578
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,738,853
Number of Sequences: 27780
Number of extensions: 392899
Number of successful extensions: 1056
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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