Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30728.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   144   2e-36
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.0  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   5.3  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    23   7.0  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         23   9.2  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  144 bits (349), Expect = 2e-36
 Identities = 66/83 (79%), Positives = 74/83 (89%)
 Frame = +3

Query: 12  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 191
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 192 VHFRDPYKFKTRKELFIAPEXLH 260
           V+FRDPY+F+  K+LFIA E ++
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMY 83



 Score =  130 bits (313), Expect = 5e-32
 Identities = 74/140 (52%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
 Frame = +1

Query: 256 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKXSDR----XXSGTCLWKLRHCDW 423
           YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK  DR      SG     + H   
Sbjct: 83  YTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPD 142

Query: 424 TQS*C*AYKSKATVWXQEGSAIKQQMHGRIVAGGGRIDKPILKAGRGYHKYKVKRNXWPI 603
           T+       S A    +   +  + M G IVAGGGRIDKPILKAGR YHKYKVKRN WP 
Sbjct: 143 TKRTRVKLPSGA---KKVLPSANRAMVG-IVAGGGRIDKPILKAGRAYHKYKVKRNCWPK 198

Query: 604 CXXCCPXTL*SXLHGGGNHQ 663
                   +    HGGGNHQ
Sbjct: 199 VRGVAMNPV-EHPHGGGNHQ 217



 Score = 77.0 bits (181), Expect = 5e-16
 Identities = 49/104 (47%), Positives = 56/104 (53%)
 Frame = +2

Query: 386 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRCMVVLLLEVDVLTNLF*KLEGA 565
           LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MV ++     +     K   A
Sbjct: 126 LARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRA 185

Query: 566 TTSTRSNVTXGPYVRXVAHXPCRASSTVVVTINHXRXASTVXRG 697
               +      P VR VA  P            H   ASTV RG
Sbjct: 186 YHKYKVKRNCWPKVRGVAMNPVEHPHG-GGNHQHIGKASTVKRG 228


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 120 RHGYIKGVVKDIIHDP 167
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 120 RHGYIKGVVKDIIHDP 167
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +3

Query: 477 RFCHQATDAWSYCCWRWTY 533
           +FC   T   +Y  W W Y
Sbjct: 513 QFCKDTTPECNYTFWEWLY 531


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 185 GCCTLPRSIQVQDKEGALHCSRXPTQANLFIVER 286
           GCC LP +   Q K+ + + +   T+   +  E+
Sbjct: 16  GCCALPANTNAQTKQDSSNNNNRTTELFAYPAEQ 49


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 514 VAGGGRIDKPILKAGRGYHK 573
           V GG   D  IL  GR YH+
Sbjct: 90  VVGGHTSDGEILYVGRAYHE 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,558
Number of Sequences: 2352
Number of extensions: 14615
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)