Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30723.Seq
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 166 4e-40
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 164 1e-39
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 163 4e-39
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 130 3e-29
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 117 2e-25
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 109 4e-23
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 108 1e-22
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 107 2e-22
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 104 2e-21
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 100 3e-20
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 95 2e-18
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 93 4e-18
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 88 1e-16
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 79 1e-13
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 70 4e-11
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 56 7e-07
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 48 3e-04
UniRef50_Q23YC1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 35 1.5
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 35 2.0
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 35 2.0
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_UPI00006CD5A3 Cluster: hypothetical protein TTHERM_0051... 33 6.0
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 166 bits (404), Expect = 4e-40
Identities = 82/118 (69%), Positives = 93/118 (78%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVD NLS LAL++V+KG ++IPGLTD V RRLGPKRAS
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRAS 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
IRKL+NL+KEDDVR+YVVKR P EK P +APKIQ L+TPVVLQR+RHRLA
Sbjct: 140 NIRKLYNLTKEDDVRQYVVKR---PLPEKDGKKPRTKAPKIQRLITPVVLQRKRHRLA 194
Score = 124 bits (300), Expect = 1e-27
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVS+PATG Q FEV+D+HKLR FY+ R AE+ AD LGDEW GYV ++AG NDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK GVLTN+RVRLL++
Sbjct: 61 FPMKQGVLTNTRVRLLLK 78
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 164 bits (399), Expect = 1e-39
Identities = 81/118 (68%), Positives = 92/118 (77%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVD+ LSVL+LVIV+KG Q+IPGLTD +PRRLGPKR
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKRVG 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRK+FNLSKEDDVR+YV++R P EK +APKIQ LVTPVVLQR+R RLA
Sbjct: 140 KIRKMFNLSKEDDVRQYVIRR---PLPEKEGKKAKSKAPKIQRLVTPVVLQRKRKRLA 194
Score = 115 bits (276), Expect = 1e-24
Identities = 49/77 (63%), Positives = 58/77 (75%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLN+SYP TGCQ L E+ DE K+R FY+ R EV + LGDEW GYV R+ G NDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLM 254
FPMK G++TN RVRLL+
Sbjct: 61 FPMKQGIMTNGRVRLLL 77
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 163 bits (395), Expect = 4e-39
Identities = 82/118 (69%), Positives = 93/118 (78%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDANLSVL LVIV+KG ++IPGLTD VPRRLGPKRAS
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRAS 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
+IRKLFNLSKEDDVR+YVV++ L +K P +APKIQ LVTP VLQ +R R+A
Sbjct: 140 RIRKLFNLSKEDDVRQYVVRKPLNKEGKK----PRTKAPKIQRLVTPRVLQHKRRRIA 193
Score = 120 bits (289), Expect = 3e-26
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLN+S+PATGCQ L EV DE KLR FYE R EV AD LG+EW GYV+R++G NDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLM 254
FPMK GVLT+ RVRLL+
Sbjct: 61 FPMKQGVLTHGRVRLLL 77
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 130 bits (314), Expect = 3e-29
Identities = 60/76 (78%), Positives = 64/76 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLL 251
FPMK GVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 47.6 bits (108), Expect = 3e-04
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC+ + R K VR V+AN+S L LV+++K P RLGP R+S
Sbjct: 80 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 129
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLN 538
I K++ L +EDD V+ LQ R +K N
Sbjct: 130 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 158
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 117 bits (282), Expect = 2e-25
Identities = 61/118 (51%), Positives = 76/118 (64%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
G CY + GE+ RK VRGCIV +LS L L +V+KG EIPGLTD V ++LGPKRA+
Sbjct: 121 GMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRAT 180
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKLFNL K DDVR+YV+ R + + + PKIQ LVT L R+R +A
Sbjct: 181 KIRKLFNLDKTDDVRKYVIGRAISKNGKNRFIK-----PKIQRLVTEKRLLRKRTLIA 233
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/78 (53%), Positives = 50/78 (64%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLN+S P Q E+ DE KL F E R V D +G+E+ GYV R+ G NDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPM GVLTN+RVRLL +
Sbjct: 102 FPMMQGVLTNNRVRLLFK 119
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 109 bits (263), Expect = 4e-23
Identities = 57/117 (48%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSC+ R G R RK VRGCIV ++ VLAL IV+KG EI GLT +PR+LGPKRA+
Sbjct: 80 GHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKRAN 139
Query: 440 KIRKLFNLSKEDD---VRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRR 601
I+KLF L KEDD +++ V++R + K K + PKIQ L+TP + R++
Sbjct: 140 NIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKDR----TKCPKIQRLITPERILRKK 192
Score = 95.5 bits (227), Expect = 1e-18
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MK N+SYP TG Q E+ D+ K IF + + EVE D LGDE+ GYV ++AG NDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 204 FPMKXGVLTNSRVRLLM 254
FPMK GV+ RVRLL+
Sbjct: 61 FPMKQGVMVRGRVRLLL 77
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 108 bits (259), Expect = 1e-22
Identities = 47/78 (60%), Positives = 59/78 (75%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLN+S+PATGCQ L E DE K R FYE +EV AD LG+EW GY++R++G NDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK VLT+ R+ LL++
Sbjct: 61 FPMKQDVLTHDRIHLLLR 78
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +2
Query: 377 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKXM 532
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + + R ++ R K M
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRM 131
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 107 bits (258), Expect = 2e-22
Identities = 55/103 (53%), Positives = 74/103 (71%)
Frame = +2
Query: 290 GERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 469
GER RK VRGC++ ++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+
Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152
Query: 470 EDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRR 598
+DVR+YVV+R + +K L +APKIQ L+TP V RR
Sbjct: 153 TEDVRKYVVRRRVVKSGKKDRL----KAPKIQRLITPRVKARR 191
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRI-FYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQ 200
MKLN++YP G FE+ DE R+ + R EV+ G E+ GY+ R+ G +DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 201 GFPMKXGVLTNSRVRLLMQ 257
GFPM GVL +SRV LL++
Sbjct: 61 GFPMVPGVLASSRVSLLVK 79
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 104 bits (249), Expect = 2e-21
Identities = 56/113 (49%), Positives = 71/113 (62%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GH Y +DGE RK +RGCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR +
Sbjct: 80 GHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRLT 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRR 598
K+R+LF K D V V K +++ +APKIQ LVT L+R+
Sbjct: 140 KLRRLFGFKKADGV-AIVQKNLIRRTWTTKDGKKRQKAPKIQRLVTESRLRRK 191
Score = 97.1 bits (231), Expect = 3e-19
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MK N+SYP TG Q E+ D+ K IF++ R VEAD LG+E+ GYVL++ G NDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPM+ GVL RVR+LM+
Sbjct: 61 FPMRQGVLFKGRVRILMR 78
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 100 bits (240), Expect = 3e-20
Identities = 55/113 (48%), Positives = 70/113 (61%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GH Y +DGE RK +RGCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR +
Sbjct: 85 GHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRLT 144
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRR 598
K+R+LF K D R + P++ +APKIQ LVT L+R+
Sbjct: 145 KLRRLFGFKKAD---RVISSEEHGPQRYGKKRQ---KAPKIQRLVTESRLRRK 191
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 94.7 bits (225), Expect = 2e-18
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
+ CY R+GER RK VRG IV ++SVL ++V+KG EI G+T+ +P R GP+RAS
Sbjct: 80 NGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASH 139
Query: 443 IRKLFNLSKEDDVRRYVVKR 502
RKLFNLS++DDV+++V++R
Sbjct: 140 FRKLFNLSQKDDVKKFVIRR 159
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 27 KLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQGF 206
K+NV+YPATG F+ +E R F + R EV+A LGDE+ GY+L++ G DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 207 PMKXGVLTNSRVRLLM 254
PM GV TN+RVRLL+
Sbjct: 61 PMMTGVATNNRVRLLL 76
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 93.5 bits (222), Expect = 4e-18
Identities = 50/118 (42%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
G SCY +DGER RK VRGCI+ +S L V+++KG +EI GLT VPRR GPKRAS
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRAS 139
Query: 440 KIRKLFNLS-KEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRL 610
+R +F ++ + D + V+KR ++P K +PK+Q L+T + R+ L
Sbjct: 140 TLRAMFGITDSKFDASKLVLKREVKPGK--------FTSPKVQRLITARRVARKNRML 189
Score = 77.8 bits (183), Expect = 2e-13
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
M++ ++YP G Q + ++ D L YE R ++E ++LG ++ GY+ R+ G DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK GV+T R+RLL++
Sbjct: 61 FPMKQGVITPRRIRLLLK 78
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 88.2 bits (209), Expect = 1e-16
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
G CY R+GER RK +RGCIV +L L++V+V G + +PGLTD VP+RL PKRAS
Sbjct: 86 GAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRAS 145
Query: 440 KIRKLFNL--SKEDDVRRYVVKRVLQPRKEKXML---NPDIRAPKIQXLVTPVVLQRRRH 604
KIR+LF L +K D + +V +++ + L ++ PK+Q +VT R++
Sbjct: 146 KIRRLFGLPTTKVDPKDQMLVCELIKELGHEVTLKNGEKKLKYPKVQRVVTDEKYARKQR 205
Query: 605 RLA 613
+A
Sbjct: 206 VIA 208
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +3
Query: 27 KLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQGF 206
K+N+S P TG + D K + + R +E + LG+E+ G R+ G ND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 207 PMKXGVLTNSRVRLLMQ 257
PM GVL + R RLL++
Sbjct: 68 PMYQGVLKSQRARLLLR 84
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 78.6 bits (185), Expect = 1e-13
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MK N++ P+TG Q E+ DE KLRI Y + ++++ +G EW + + G DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK G+L+ SRV++L++
Sbjct: 61 FPMKEGILSPSRVKILLK 78
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/109 (33%), Positives = 64/109 (58%)
Frame = +2
Query: 284 RDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL 463
+ GER RK VRGCIV +SVL + ++ ++ +T+ N + L KR+S +RK+ L
Sbjct: 90 KKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCL 148
Query: 464 SKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRL 610
+K DD+R++ +K + + K K KIQ L+TP+ +Q+++ +
Sbjct: 149 TKTDDIRKHYIK-IAKDFKNKV---------KIQRLITPIKIQKKKENI 187
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 70.1 bits (164), Expect = 4e-11
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEW 158
MKLN+S+PATGCQ L EV DE KLR FYE R EV AD LG+EW
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEW 45
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 56.0 bits (129), Expect = 7e-07
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
G + Y R G R RK VRG IV + VL L+I+R G +EI GLT+ P++
Sbjct: 65 GDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEK 124
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIR 550
K+RK+F + E+ ++ +L+ + P IR
Sbjct: 125 KLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIR 161
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = +3
Query: 66 LFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQGFPMKXGVLTNSRVR 245
+FE+ +++R+ Y+ + + + LG+E+ G ++ + G +D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 246 LLM 254
L+
Sbjct: 60 PLL 62
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 47.6 bits (108), Expect = 3e-04
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC+ + R K VR V+AN+S L LV+++K P RLGP R+S
Sbjct: 27 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 76
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLN 538
I K++ L +EDD V+ LQ R +K N
Sbjct: 77 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 105
>UniRef50_Q23YC1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1188
Score = 36.7 bits (81), Expect = 0.48
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 326 VDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 505
++A + A + A+EI P ++ +K +LFN +DD+ + + V
Sbjct: 33 LEAKNIIKAFIQTENDAEEIKSKALNKKPSYWKDQKDNKTDQLFNRKLDDDIELALERDV 92
Query: 506 -LQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
QP K+ +LN ++R KI+ + + Q++ L+
Sbjct: 93 PKQPEKDNVLLNMELRHAKIKQMKEDRIKQKQEAELS 129
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 162 GYVLRVAGXNDKQGFPMKXGVLTNSRVRLLMQXAT 266
GY LR+ G +DK GFPMK V R + L+ T
Sbjct: 44 GYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 34.7 bits (76), Expect = 2.0
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 8/116 (6%)
Frame = +2
Query: 200 RIPDETXRPDKQP--------CSSSDAXGHSCYXXXRDGERXRKXVRGCIVDANLSVLAL 355
R+P+E + + +P C+ A GH+ R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 356 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKE 523
+ A P RR+GP RA +++ L + +R QP +E
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDLQGPCSDSRSGVPARRRCAQPGQE 164
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MK+N++ P G Q + DE I + +E LG+++ + G +DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGR-KIGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 204 FPMKXGVLTNSRVRL 248
F +K + T R+++
Sbjct: 60 FLLKKNLNTFERLKI 74
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -2
Query: 254 HQKTNTAVCQDAXFHRESLLVVAXSDTKYIALPFI 150
H++ +T V Q A H E+LLVV D + ++LPF+
Sbjct: 177 HEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 353 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 493
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_UPI00006CD5A3 Cluster: hypothetical protein
TTHERM_00515240; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00515240 - Tetrahymena
thermophila SB210
Length = 1078
Score = 33.1 bits (72), Expect = 6.0
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 446 RKLFNLSK--EDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRL 610
+KL N K ++V + + K + P+KE +LNP++ AP++ T +Q++ +R+
Sbjct: 130 KKLSNFIKVEAEEVTKQLGKIQISPKKESNLLNPNLVAPQLPYQNTQRQIQKQSNRI 186
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,842,425
Number of Sequences: 1657284
Number of extensions: 9653256
Number of successful extensions: 22420
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 21833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22398
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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