Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30723.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    26   0.89 
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   2.1  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   2.1  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   4.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   6.3  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    23   8.3  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    23   8.3  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -1

Query: 405 FPSVNPGISWAPLRTITRAKTERLASTIHPR 313
           +P +  G + APLR+I   + +++A+++HPR
Sbjct: 408 WPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 138 QPLLRRXCAFRKRYEACAR 82
           Q  +RR CAF K++EA  R
Sbjct: 379 QAHIRRHCAFAKQFEALCR 397


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 138 QPLLRRXCAFRKRYEACAR 82
           Q  +RR CAF K++EA  R
Sbjct: 410 QAHIRRHCAFAKQFEALCR 428


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 352 SCYCXQGCPGN 384
           +CYC   CPGN
Sbjct: 73  TCYCEGHCPGN 83


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 41   VPGNGMPXVVRSGGRAQA 94
            VPG+G+P    SGG   A
Sbjct: 3225 VPGSGLPAAAASGGAPSA 3242


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 422 LDGGVHFHQSIQEFPGH 372
           +DGG++   S++ FPG+
Sbjct: 167 VDGGLNIPHSVKRFPGY 183


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 362 VRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 469
           V  GAQ++ G   G  P  + PK    IR     SK
Sbjct: 199 VYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSK 234


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 176 CRWXQRQARIPDETXRPDKQPCSSSDAXGHSCYXXXRD 289
           C   + +  +P     P  +PC SSD  G SC     D
Sbjct: 66  CECKETREPLPYMYACPGTEPCQSSDRLG-SCSKSMHD 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,650
Number of Sequences: 2352
Number of extensions: 10551
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)