Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30723.Seq
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 165 6e-41
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 165 6e-41
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 165 6e-41
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 165 6e-41
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 165 6e-41
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 165 6e-41
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 165 6e-41
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 165 6e-41
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 130 2e-30
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 130 2e-30
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 48 1e-05
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 48 1e-05
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 48 1e-05
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 48 1e-05
AE013599-1733|AAF58364.1| 611|Drosophila melanogaster CG13330-P... 28 9.5
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 165 bits (400), Expect = 6e-41
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRAS
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRAS 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKL+NLSKEDDVRR+VV+R L + K + +APKIQ L+TPVVLQR+ R+A
Sbjct: 140 KIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATS---KAPKIQRLITPVVLQRKHRRIA 194
Score = 132 bits (320), Expect = 3e-31
Identities = 61/78 (78%), Positives = 66/78 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK GVLT+ RVRLL++
Sbjct: 61 FPMKQGVLTHGRVRLLLK 78
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 165 bits (400), Expect = 6e-41
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRAS
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRAS 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKL+NLSKEDDVRR+VV+R L + K + +APKIQ L+TPVVLQR+ R+A
Sbjct: 140 KIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATS---KAPKIQRLITPVVLQRKHRRIA 194
Score = 132 bits (320), Expect = 3e-31
Identities = 61/78 (78%), Positives = 66/78 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK GVLT+ RVRLL++
Sbjct: 61 FPMKQGVLTHGRVRLLLK 78
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 165 bits (400), Expect = 6e-41
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRAS
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRAS 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKL+NLSKEDDVRR+VV+R L + K + +APKIQ L+TPVVLQR+ R+A
Sbjct: 140 KIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATS---KAPKIQRLITPVVLQRKHRRIA 194
Score = 132 bits (320), Expect = 3e-31
Identities = 61/78 (78%), Positives = 66/78 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK GVLT+ RVRLL++
Sbjct: 61 FPMKQGVLTHGRVRLLLK 78
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 165 bits (400), Expect = 6e-41
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRAS
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRAS 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKL+NLSKEDDVRR+VV+R L + K + +APKIQ L+TPVVLQR+ R+A
Sbjct: 140 KIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATS---KAPKIQRLITPVVLQRKHRRIA 194
Score = 132 bits (320), Expect = 3e-31
Identities = 61/78 (78%), Positives = 66/78 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK GVLT+ RVRLL++
Sbjct: 61 FPMKQGVLTHGRVRLLLK 78
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 165 bits (400), Expect = 6e-41
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRAS
Sbjct: 49 GHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRAS 108
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKL+NLSKEDDVRR+VV+R L + K + +APKIQ L+TPVVLQR+ R+A
Sbjct: 109 KIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATS---KAPKIQRLITPVVLQRKHRRIA 163
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 129 VEADQLGDEWXGYVLRVAGXNDKQGFPMKXGVLTNSRVRLLMQ 257
VEAD LGDEW GY LR+AG NDKQGFPMK GVLT+ RVRLL++
Sbjct: 5 VEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLK 47
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 165 bits (400), Expect = 6e-41
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRAS
Sbjct: 49 GHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRAS 108
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKL+NLSKEDDVRR+VV+R L + K + +APKIQ L+TPVVLQR+ R+A
Sbjct: 109 KIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATS---KAPKIQRLITPVVLQRKHRRIA 163
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 129 VEADQLGDEWXGYVLRVAGXNDKQGFPMKXGVLTNSRVRLLMQ 257
VEAD LGDEW GY LR+AG NDKQGFPMK GVLT+ RVRLL++
Sbjct: 5 VEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLK 47
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 165 bits (400), Expect = 6e-41
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRAS
Sbjct: 83 GHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRAS 142
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKL+NLSKEDDVRR+VV+R L + K + +APKIQ L+TPVVLQR+ R+A
Sbjct: 143 KIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATS---KAPKIQRLITPVVLQRKHRRIA 197
Score = 128 bits (310), Expect = 5e-30
Identities = 59/76 (77%), Positives = 64/76 (84%)
Frame = +3
Query: 30 LNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQGFP 209
LNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 210 MKXGVLTNSRVRLLMQ 257
MK GVLT+ RVRLL++
Sbjct: 66 MKQGVLTHGRVRLLLK 81
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 165 bits (400), Expect = 6e-41
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 260 GHSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSCY R GER RK VRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRAS
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRAS 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLNPDIRAPKIQXLVTPVVLQRRRHRLA 613
KIRKL+NLSKEDDVRR+VV+R L + K + +APKIQ L+TPVVLQR+ R+A
Sbjct: 140 KIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATS---KAPKIQRLITPVVLQRKHRRIA 194
Score = 132 bits (320), Expect = 3e-31
Identities = 61/78 (78%), Positives = 66/78 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLLMQ 257
FPMK GVLT+ RVRLL++
Sbjct: 61 FPMKQGVLTHGRVRLLLK 78
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 130 bits (314), Expect = 2e-30
Identities = 60/76 (78%), Positives = 64/76 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLL 251
FPMK GVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC+ + R K VR V+AN+S L LV+++K P RLGP R+S
Sbjct: 80 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 129
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLN 538
I K++ L +EDD V+ LQ R +K N
Sbjct: 130 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 158
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 130 bits (314), Expect = 2e-30
Identities = 60/76 (78%), Positives = 64/76 (84%)
Frame = +3
Query: 24 MKLNVSYPATGCQXLFEVVDEHKLRIFYEXRXXAEVEADQLGDEWXGYVLRVAGXNDKQG 203
MKLNVSYPATGCQ LFEVVDEHKLR+FYE R VEAD LGDEW GY LR+AG NDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKXGVLTNSRVRLL 251
FPMK GVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC+ + R K VR V+AN+S L LV+++K P RLGP R+S
Sbjct: 80 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 129
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLN 538
I K++ L +EDD V+ LQ R +K N
Sbjct: 130 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 158
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC+ + R K VR V+AN+S L LV+++K P RLGP R+S
Sbjct: 29 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 78
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLN 538
I K++ L +EDD V+ LQ R +K N
Sbjct: 79 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 107
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC+ + R K VR V+AN+S L LV+++K P RLGP R+S
Sbjct: 27 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 76
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLN 538
I K++ L +EDD V+ LQ R +K N
Sbjct: 77 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 105
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC+ + R K VR V+AN+S L LV+++K P RLGP R+S
Sbjct: 15 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 64
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLN 538
I K++ L +EDD V+ LQ R +K N
Sbjct: 65 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 93
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +2
Query: 263 HSCYXXXRDGERXRKXVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC+ + R K VR V+AN+S L LV+++K P RLGP R+S
Sbjct: 15 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 64
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRKEKXMLN 538
I K++ L +EDD V+ LQ R +K N
Sbjct: 65 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 93
>AE013599-1733|AAF58364.1| 611|Drosophila melanogaster CG13330-PA
protein.
Length = 611
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1
Query: 144 TDQPLLRRXCAFRKRYEACARPPLRTT 64
TD PLLR C RYEA R P TT
Sbjct: 124 TDSPLLRTCCQ-SVRYEAMRRGPSNTT 149
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,469,275
Number of Sequences: 53049
Number of extensions: 459666
Number of successful extensions: 1128
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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