Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30722.Seq
         (422 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69181-1|CAA48925.1|  121|Homo sapiens ribosomal protein L31 pro...   123   2e-28
X15940-1|CAA34066.1|  125|Homo sapiens protein ( Human mRNA for ...   123   2e-28
BC070373-1|AAH70373.1|  125|Homo sapiens ribosomal protein L31 p...   123   2e-28
BC070210-1|AAH70210.1|  121|Homo sapiens RPL31 protein protein.       123   2e-28
BC017343-1|AAH17343.1|  125|Homo sapiens ribosomal protein L31 p...   123   2e-28
AC016738-2|AAY14823.1|  125|Homo sapiens unknown protein.             123   2e-28
AB061830-1|BAB79468.1|  125|Homo sapiens ribosomal protein L31 p...   123   2e-28
AB007180-1|BAA25839.1|   47|Homo sapiens ribosomal protein L31 p...    50   2e-06

>X69181-1|CAA48925.1|  121|Homo sapiens ribosomal protein L31
           protein.
          Length = 121

 Score =  123 bits (297), Expect = 2e-28
 Identities = 51/72 (70%), Positives = 65/72 (90%)
 Frame = +3

Query: 39  KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
           KK + +   +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 7   KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 66

Query: 219 FLWSKGVRNVPF 254
            +W+KG+RNVP+
Sbjct: 67  AVWAKGIRNVPY 78



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
           N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 89  NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119


>X15940-1|CAA34066.1|  125|Homo sapiens protein ( Human mRNA for
           ribosomal protein L31. ).
          Length = 125

 Score =  123 bits (297), Expect = 2e-28
 Identities = 51/72 (70%), Positives = 65/72 (90%)
 Frame = +3

Query: 39  KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
           KK + +   +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11  KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70

Query: 219 FLWSKGVRNVPF 254
            +W+KG+RNVP+
Sbjct: 71  AVWAKGIRNVPY 82



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
           N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93  NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>BC070373-1|AAH70373.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  123 bits (297), Expect = 2e-28
 Identities = 51/72 (70%), Positives = 65/72 (90%)
 Frame = +3

Query: 39  KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
           KK + +   +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11  KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70

Query: 219 FLWSKGVRNVPF 254
            +W+KG+RNVP+
Sbjct: 71  AVWAKGIRNVPY 82



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
           N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93  NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>BC070210-1|AAH70210.1|  121|Homo sapiens RPL31 protein protein.
          Length = 121

 Score =  123 bits (297), Expect = 2e-28
 Identities = 51/72 (70%), Positives = 65/72 (90%)
 Frame = +3

Query: 39  KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
           KK + +   +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11  KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70

Query: 219 FLWSKGVRNVPF 254
            +W+KG+RNVP+
Sbjct: 71  AVWAKGIRNVPY 82



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +2

Query: 284 NDDEDSAHKLFTLVTYVPVASIK 352
           N+DEDS +KL+TLVTYVPV + K
Sbjct: 93  NEDEDSPNKLYTLVTYVPVTTFK 115


>BC017343-1|AAH17343.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  123 bits (297), Expect = 2e-28
 Identities = 51/72 (70%), Positives = 65/72 (90%)
 Frame = +3

Query: 39  KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
           KK + +   +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11  KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70

Query: 219 FLWSKGVRNVPF 254
            +W+KG+RNVP+
Sbjct: 71  AVWAKGIRNVPY 82



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
           N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93  NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>AC016738-2|AAY14823.1|  125|Homo sapiens unknown protein.
          Length = 125

 Score =  123 bits (297), Expect = 2e-28
 Identities = 51/72 (70%), Positives = 65/72 (90%)
 Frame = +3

Query: 39  KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
           KK + +   +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11  KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70

Query: 219 FLWSKGVRNVPF 254
            +W+KG+RNVP+
Sbjct: 71  AVWAKGIRNVPY 82



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
           N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93  NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>AB061830-1|BAB79468.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  123 bits (297), Expect = 2e-28
 Identities = 51/72 (70%), Positives = 65/72 (90%)
 Frame = +3

Query: 39  KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
           KK + +   +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11  KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70

Query: 219 FLWSKGVRNVPF 254
            +W+KG+RNVP+
Sbjct: 71  AVWAKGIRNVPY 82



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
           N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93  NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>AB007180-1|BAA25839.1|   47|Homo sapiens ribosomal protein L31
           protein.
          Length = 47

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
           N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 15  NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,536,638
Number of Sequences: 237096
Number of extensions: 952330
Number of successful extensions: 1455
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)