Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30721.Seq
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.9  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   5.9  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 686 PEPGIFGSXSRLPSNCQK 633
           P+P  F     LP NCQK
Sbjct: 418 PDPEKFDPDRFLPENCQK 435


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 686 PEPGIFGSXSRLPSNCQK 633
           P+P  F     LP NCQK
Sbjct: 418 PDPEKFDPDRFLPENCQK 435


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 222 EGAQKEDQRSRKENKGKPEPKPAK 293
           +G   ++Q    EN   P+P+P K
Sbjct: 236 KGRLTDEQLKELENPPTPKPRPTK 259


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 686 PEPGIFGSXSRLPSNCQK 633
           PEP  F     LP NC K
Sbjct: 102 PEPEKFDPDRFLPENCDK 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,192
Number of Sequences: 336
Number of extensions: 2389
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)