Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30721.Seq
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p pro... 31 1.2
AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like... 31 1.2
AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA... 31 1.2
AE014296-3627|AAF51789.2| 686|Drosophila melanogaster CG7421-PB... 31 1.2
AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p pro... 31 1.6
AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,... 31 1.6
AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,... 31 1.6
AY051984-1|AAK93408.1| 838|Drosophila melanogaster LD45365p pro... 30 3.8
AF220364-1|AAF37265.1| 838|Drosophila melanogaster Plenty of SH... 30 3.8
AE013599-2508|AAF57833.1| 838|Drosophila melanogaster CG4909-PA... 30 3.8
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr... 29 5.0
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ... 29 6.6
AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P... 29 8.7
>BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p
protein.
Length = 720
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 201 VKSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 377
+ + +A G ED S E+ P+ KPA + K +K+ + S+D S E++K
Sbjct: 58 IPAIKATAGDSSEDSDSDSESDAAPK-KPATAPALTNGKAVKKAASSTSEDSDSEEEKK 115
>AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like
nucleolar protein protein.
Length = 720
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 201 VKSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 377
+ + +A G ED S E+ P+ KPA + K +K+ + S+D S E++K
Sbjct: 58 IPAIKATAGDSSEDSDSDSESDAAPK-KPATAPALTNGKAVKKAASSTSEDSDSEEEKK 115
>AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA,
isoform A protein.
Length = 720
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 201 VKSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 377
+ + +A G ED S E+ P+ KPA + K +K+ + S+D S E++K
Sbjct: 58 IPAIKATAGDSSEDSDSDSESDAAPK-KPATAPALTNGKAVKKAASSTSEDSDSEEEKK 115
>AE014296-3627|AAF51789.2| 686|Drosophila melanogaster CG7421-PB,
isoform B protein.
Length = 686
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 201 VKSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 377
+ + +A G ED S E+ P+ KPA + K +K+ + S+D S E++K
Sbjct: 58 IPAIKATAGDSSEDSDSDSESDAAPK-KPATAPALTNGKAVKKAASSTSEDSDSEEEKK 115
>AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p protein.
Length = 1150
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 222 EGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGP 389
+GA++E +R K+ KGK E K G T K +++ KSG ++KGK P
Sbjct: 921 DGARREGERPSKK-KGKGERKKGGGRKRKTEKYESDSEEEPGASGKSG-KKKGKKP 974
>AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,
isoform B protein.
Length = 1150
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 222 EGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGP 389
+GA++E +R K+ KGK E K G T K +++ KSG ++KGK P
Sbjct: 921 DGARREGERPSKK-KGKGERKKGGGRKRKTEKYESDSEEEPGASGKSG-KKKGKKP 974
>AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,
isoform A protein.
Length = 1150
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 222 EGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGP 389
+GA++E +R K+ KGK E K G T K +++ KSG ++KGK P
Sbjct: 921 DGARREGERPSKK-KGKGERKKGGGRKRKTEKYESDSEEEPGASGKSG-KKKGKKP 974
>AY051984-1|AAK93408.1| 838|Drosophila melanogaster LD45365p
protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 377
++A AG+G +K ++ + + KP+P PA+ V P + ++ + +S +Q++
Sbjct: 78 QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134
>AF220364-1|AAF37265.1| 838|Drosophila melanogaster Plenty of SH3s
protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 377
++A AG+G +K ++ + + KP+P PA+ V P + ++ + +S +Q++
Sbjct: 78 QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134
>AE013599-2508|AAF57833.1| 838|Drosophila melanogaster CG4909-PA
protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 377
++A AG+G +K ++ + + KP+P PA+ V P + ++ + +S +Q++
Sbjct: 78 QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134
>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
protein.
Length = 5327
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPT--RKGIKETQNVKSQDXKSGEQQKGKGP 389
A+K + SR+E+ + P P+K + PT K +K+ + KS++ S + K P
Sbjct: 3235 AEKSKEESRRESVAEKSPLPSKEASRPTSVAKSVKD-EAEKSKEESSRDSVAEKSP 3289
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGPA 392
A+K + SR+E+ + P P+K + PT ++VK + KS E+ + + A
Sbjct: 3494 AEKSKEESRRESVAEKSPLPSKEASRPT----SVAESVKDEAEKSKEESRRESVA 3544
>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
protein.
Length = 5412
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGPA 392
A+K + SR+E+ + P P+K + PT ++VK + KS E+ + + A
Sbjct: 3702 AEKSKEESRRESVAEKSPLPSKEASRPT----SVAESVKDEAEKSKEESRRESVA 3752
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGPA 392
A+K + SR+E+ + P P+K + PT ++VK + KS E+ + + A
Sbjct: 3813 AEKSKEESRRESVAEKSPLPSKEASRPT----SVAESVKDEADKSKEESRRESGA 3863
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 377
A+K + SR+E+ + P P+K + PT ++VK + KS E+ +
Sbjct: 3443 AEKSKEESRRESVAEKSPLPSKEASRPT----SVAESVKDEAEKSKEESR 3488
>AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA
protein.
Length = 2465
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 207 SARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQ 374
S + EG K++ + R + + P PKPA + KG + + K K+G+ Q
Sbjct: 815 SGKVKEGPAKKEPKKRPDKQMPPPPKPA---DKSSEKGSGKKSSSKKAAQKAGQPQ 867
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,649,701
Number of Sequences: 53049
Number of extensions: 513107
Number of successful extensions: 1592
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1587
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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