Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30720.Seq
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   1.4  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    25   3.3  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   7.6  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   7.6  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 454 ARFHPRCQTAHRRSKQNGSTEPPYS 528
           ARF P   T+HR S  N S+  P S
Sbjct: 344 ARFDPSALTSHRSSSANCSSAAPKS 368


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
 Frame = -1

Query: 688 NPXEPRPF----WLKAPTCCSPCPSRNGPRK 608
           NP + R F    W+    CCS   SRNG  K
Sbjct: 23  NPLDRRNFGVCVWMLCEVCCSRKCSRNGSPK 53


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 496 KQNGSTEPPYSEPRFEEIKKEVSSYIQEDWATTQ 597
           +++G+ E  +SE  F   K+E     +++W   Q
Sbjct: 229 RRSGTLEVTFSERTFVTPKRESMEQAEQEWTLKQ 262


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 496 KQNGSTEPPYSEPRFEEIKKEVSSYIQEDWATTQ 597
           +++G+ E  +SE  F   K+E     +++W   Q
Sbjct: 229 RRSGTLEVTFSERTFVTPKRESMEQAEQEWTLKQ 262


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,338
Number of Sequences: 2352
Number of extensions: 16486
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)