Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30716.Seq
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 88 7e-18
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 88 7e-18
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 84 9e-17
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 84 9e-17
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 73 2e-13
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 34 0.093
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 34 0.093
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 34 0.093
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 34 0.093
Z81117-7|CAB03315.2| 329|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL034488-14|CAE11311.1| 341|Caenorhabditis elegans Hypothetical... 29 3.5
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 29 3.5
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 29 3.5
Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical p... 28 8.1
AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine re... 28 8.1
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +2
Query: 362 SVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESI 541
+V F +L YV G+TAGAHRLWSHKSYKA P++I LM+ ++A Q I +
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 542 TS--TAIRTQIHITQAVAFFYSHIGWLFVRKHPEVKKKG 652
T H T FF++H+GWL VRKHP+VK++G
Sbjct: 137 HHKWTDTDADPHNTTR-GFFFAHMGWLLVRKHPQVKEQG 174
Score = 60.9 bits (141), Expect = 9e-10
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWP---FSWI-----RVPVLCSSND-WR 408
P + EIV++N+ + LH GLY AKW F+++ + ++ W
Sbjct: 42 PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101
Query: 409 YSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRG 588
+ S + P I I N ++ Q+ W RDHR HHK++DTDADPHN +RG
Sbjct: 102 HK-SYKATTPMRIFLMI-----LNNIAL--QNDVIEWARDHRCHHKWTDTDADPHNTTRG 153
Query: 589 FLLFSYRLVVRQKTP 633
F ++ +K P
Sbjct: 154 FFFAHMGWLLVRKHP 168
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +2
Query: 362 SVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESI 541
+V F +L YV G+TAGAHRLWSHKSYKA P++I LM+ ++A Q I +
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 542 TS--TAIRTQIHITQAVAFFYSHIGWLFVRKHPEVKKKG 652
T H T FF++H+GWL VRKHP+VK++G
Sbjct: 137 HHKWTDTDADPHNTTR-GFFFAHMGWLLVRKHPQVKEQG 174
Score = 60.9 bits (141), Expect = 9e-10
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWP---FSWI-----RVPVLCSSND-WR 408
P + EIV++N+ + LH GLY AKW F+++ + ++ W
Sbjct: 42 PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101
Query: 409 YSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRG 588
+ S + P I I N ++ Q+ W RDHR HHK++DTDADPHN +RG
Sbjct: 102 HK-SYKATTPMRIFLMI-----LNNIAL--QNDVIEWARDHRCHHKWTDTDADPHNTTRG 153
Query: 589 FLLFSYRLVVRQKTP 633
F ++ +K P
Sbjct: 154 FFFAHMGWLLVRKHP 168
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 84.2 bits (199), Expect = 9e-17
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESITS- 547
F++ YV + G+TAGAHRLWSHKSYKA P++I LM+ ++A Q I +
Sbjct: 79 FSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHK 138
Query: 548 -TAIRTQIHITQAVAFFYSHIGWLFVRKHPEVKKKG 652
T H T FF++H+GWL VRKHP+VK+ G
Sbjct: 139 WTDTDADPHNTTR-GFFFTHMGWLLVRKHPQVKEHG 173
Score = 61.7 bits (143), Expect = 5e-10
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPFSWIRVPVLCSSNDWRYSWSSQTVV 435
P + EIV++N+ + LHV GLY AKW + + S + + + +
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSG-FGITAGAHRLW 99
Query: 436 PQIIQSKITSSNPTNGL--SFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGFLLFSYR 609
T L + Q+ W RDHR HHK++DTDADPHN +RGF
Sbjct: 100 SHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMG 159
Query: 610 LVVRQKTP 633
++ +K P
Sbjct: 160 WLLVRKHP 167
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 660 IDFPDLFDNPALMFQHRYSKTFIPIVCF 743
+D DLF +P L+FQ ++ + + CF
Sbjct: 176 LDLSDLFSDPVLVFQRKHYFPLVILFCF 203
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 84.2 bits (199), Expect = 9e-17
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESITS- 547
F++ YV + G+TAGAHRLWSHKSYKA P++I LM+ ++A Q I +
Sbjct: 79 FSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHK 138
Query: 548 -TAIRTQIHITQAVAFFYSHIGWLFVRKHPEVKKKG 652
T H T FF++H+GWL VRKHP+VK+ G
Sbjct: 139 WTDTDADPHNTTR-GFFFTHMGWLLVRKHPQVKEHG 173
Score = 61.7 bits (143), Expect = 5e-10
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPFSWIRVPVLCSSNDWRYSWSSQTVV 435
P + EIV++N+ + LHV GLY AKW + + S + + + +
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSG-FGITAGAHRLW 99
Query: 436 PQIIQSKITSSNPTNGL--SFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGFLLFSYR 609
T L + Q+ W RDHR HHK++DTDADPHN +RGF
Sbjct: 100 SHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMG 159
Query: 610 LVVRQKTP 633
++ +K P
Sbjct: 160 WLLVRKHP 167
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 660 IDFPDLFDNPALMFQHRYSKTFIPIVCF 743
+D DLF +P L+FQ ++ + + CF
Sbjct: 176 LDLSDLFSDPVLVFQRKHYFPLVILFCF 203
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +2
Query: 338 VVRQRSGPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPI 517
+V Q +VG+ +L + ++GVT GAHRLW+H++YKA L ++ LM+ S+A Q I
Sbjct: 60 LVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDII 119
Query: 518 GFETIESITS--TAIRTQIHITQAVAFFYSHIGWLFVRKHPEVKKKG 652
+ T H T F++H+GWL V+KH ++K +G
Sbjct: 120 DWARDHRCHHKWTDTDADPHSTNR-GMFFAHMGWLLVKKHDQLKIQG 165
Score = 60.9 bits (141), Expect = 9e-10
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGLYLCCTTAKW-PFSWI----RVPVLCSSNDWRYSWSSQTV 432
EIV+KN+ + + LH+ GLY AKW W+ + + + W+ +
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 433 VPQIIQSKITSSNPTNGLSFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRG 588
+ S N ++F Q+ W RDHR HHK++DTDADPH+ +RG
Sbjct: 97 KATL--SWRVFLMLINSIAF--QNDIIDWARDHRCHHKWTDTDADPHSTNRG 144
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 660 IDFPDLFDNPALMFQHRYSKTFIPIVCF 743
+D DL+++P LMFQ + + I CF
Sbjct: 168 LDLSDLYEDPVLMFQRKNYLPLVGIFCF 195
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +2
Query: 338 VVRQRSGPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPI 517
+V Q +VG+ +L + ++GVT GAHRLW+H++YKA L ++ LM+ S+A Q I
Sbjct: 60 LVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDII 119
Query: 518 GFETIESITS--TAIRTQIHITQAVAFFYSHIGWLFVRKHPEVKKKG 652
+ T H T F++H+GWL V+KH ++K +G
Sbjct: 120 DWARDHRCHHKWTDTDADPHSTNR-GMFFAHMGWLLVKKHDQLKIQG 165
Score = 60.9 bits (141), Expect = 9e-10
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGLYLCCTTAKW-PFSWI----RVPVLCSSNDWRYSWSSQTV 432
EIV+KN+ + + LH+ GLY AKW W+ + + + W+ +
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 433 VPQIIQSKITSSNPTNGLSFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRG 588
+ S N ++F Q+ W RDHR HHK++DTDADPH+ +RG
Sbjct: 97 KATL--SWRVFLMLINSIAF--QNDIIDWARDHRCHHKWTDTDADPHSTNRG 144
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 660 IDFPDLFDNPALMFQHRYSKTFIPIVCF 743
+D DL+++P LMFQ + + I CF
Sbjct: 168 LDLSDLYEDPVLMFQRKNYLPLVGIFCF 195
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.093
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 346 TAKWPFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVR 525
TA + S+ PV+ ++ D SWS+ + PQ + +K T+S GL G +TT ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 526 DHRVHHKYSDTDAD 567
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.093
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 346 TAKWPFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVR 525
TA + S+ PV+ ++ D SWS+ + PQ + +K T+S GL G +TT ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 526 DHRVHHKYSDTDAD 567
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.093
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 346 TAKWPFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVR 525
TA + S+ PV+ ++ D SWS+ + PQ + +K T+S GL G +TT ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 526 DHRVHHKYSDTDAD 567
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.093
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 346 TAKWPFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVR 525
TA + S+ PV+ ++ D SWS+ + PQ + +K T+S GL G +TT ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 526 DHRVHHKYSDTDAD 567
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>Z81117-7|CAB03315.2| 329|Caenorhabditis elegans Hypothetical
protein T06E6.6 protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/74 (20%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +2
Query: 311 LQCFMAYIFVV-----RQRSGPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQIL 475
+ CF+ Y++++ + + FA++C+ + GV+ + LW++K Y+ + ++
Sbjct: 244 ITCFIPYLYIMICCYLNYHNQSANNFAFICF--SCHGVSGASIFLWTYKPYRKVVNAKLR 301
Query: 476 LMVFLSLANQRPPI 517
++ +QRP +
Sbjct: 302 ELISFMHCSQRPVV 315
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical protein
Y76A2B.1 protein.
Length = 1057
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +1
Query: 343 TTAKWPFSWIRVPVLCSSN-DWRYSWSSQTVVPQIIQSKI-TSSNPTNGLSFTGQSKTTH 516
T KW PV S D +S + + + S++ +SS+ TN + T + TH
Sbjct: 925 TGTKWMLGEQAAPVFRSLKPDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTPSTSVTH 984
Query: 517 WVRD---HRVHHKYSDTDADPHNASR 585
+ H HH++ + + P +SR
Sbjct: 985 STTEKHHHHQHHQHQEPTSVPTPSSR 1010
>AL034488-14|CAE11311.1| 341|Caenorhabditis elegans Hypothetical
protein Y54G11A.15 protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 572 ITQAVAFFYSHIGWLFVRKHPEVKKKGKTNRLSGFVR*SCINVSAQVF 715
+T + F+ SHI W + K+ G L F CI V+ F
Sbjct: 208 LTSMIWFYCSHIAWHLLPKNNPSMSSGTRKMLKNFFISMCIQVAIPTF 255
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +1
Query: 343 TTAKWPFSWIRVPVLCSSN-DWRYSWSSQTVVPQIIQSKI-TSSNPTNGLSFTGQSKTTH 516
T KW PV S D +S + + + S++ +SS+ TN + T + TH
Sbjct: 925 TGTKWMLGEQAAPVFRSLKPDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTPSTSVTH 984
Query: 517 WVRD---HRVHHKYSDTDADPHNASR 585
+ H HH++ + + P +SR
Sbjct: 985 STTEKHHHHQHHQHQEPTSVPTPSSR 1010
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +1
Query: 343 TTAKWPFSWIRVPVLCSSN-DWRYSWSSQTVVPQIIQSKI-TSSNPTNGLSFTGQSKTTH 516
T KW PV S D +S + + + S++ +SS+ TN + T + TH
Sbjct: 925 TGTKWMLGEQAAPVFRSLKPDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTPSTSVTH 984
Query: 517 WVRD---HRVHHKYSDTDADPHNASR 585
+ H HH++ + + P +SR
Sbjct: 985 STTEKHHHHQHHQHQEPTSVPTPSSR 1010
>Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical
protein R10D12.17 protein.
Length = 364
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 5 FSLVYS*YFS-GHYFKSQMEEAGIXXPRP 88
FS + S S HY+K +EE G+ P+P
Sbjct: 140 FSFILSGIMSISHYYKDHIEEVGLCIPQP 168
>AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 12 protein.
Length = 293
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -1
Query: 307 VDKYV*IYFYRRFHIL*VYH*RFDTIMF*TRIFYFGYNQSIIRLILCHFRI 155
V++ V YF ++H YH F I +G+N+ I+ + C F++
Sbjct: 101 VERVVAAYFPIQYHN---YHQSFPKIPIMITAIIYGFNEDIVLYVFCDFQL 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,007,811
Number of Sequences: 27780
Number of extensions: 389656
Number of successful extensions: 972
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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