Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30716.Seq
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 43 2e-04
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 42 4e-04
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 41 8e-04
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 41 8e-04
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 41 8e-04
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 40 0.001
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 40 0.002
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 40 0.002
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 39 0.003
At1g72270.1 68414.m08355 expressed protein 29 4.3
At1g61270.1 68414.m06905 lysine and histidine specific transport... 29 4.3
At5g52920.1 68418.m06567 pyruvate kinase, putative similar to py... 28 5.7
At5g01890.1 68418.m00108 leucine-rich repeat transmembrane prote... 28 7.6
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 490 FTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGFLLFSYRL 612
F Q WV HR HH+++D+D DPH+ G LLFS+ L
Sbjct: 102 FALQGDPMDWVSIHRFHHQFTDSDRDPHSPKEG-LLFSHIL 141
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESI--T 544
F + + T+ +T HR SH+S+K L+ A Q P+ + +I
Sbjct: 61 FGLVLFALTTLSITFSFHRNLSHRSFKIPKWLEYPWAYSAVFALQGDPMDWVSIHRFHHQ 120
Query: 545 STAIRTQIHITQAVAFFYSHIGWLFVRKHPEVKKKGKTNRL 667
T H + +SHI W+F ++ + K G+ N L
Sbjct: 121 FTDSDRDPH-SPKEGLLFSHILWIFDTQYIKYKCGGRDNVL 160
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 499 QSKTTHWVRDHRVHHKYSDTDADPHNASRGFLLFSYRL 612
Q WV HR HH+++D+D DPH+ + GF FS+ L
Sbjct: 110 QGDPIDWVSTHRYHHQFTDSDRDPHSPNEGF-WFSHLL 146
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +2
Query: 359 PSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIES 538
P++ A + Y +G+T HR +H+S+K L+ LA Q PI + +
Sbjct: 62 PALRVALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHR 121
Query: 539 I--TSTAIRTQIHITQAVAFFYSHIGWLF 619
T H + F++SH+ WLF
Sbjct: 122 YHHQFTDSDRDPH-SPNEGFWFSHLLWLF 149
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 41.1 bits (92), Expect = 8e-04
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 499 QSKTTHWVRDHRVHHKYSDTDADPHNASRGF 591
Q WV +HR HHK+ +T DPH+ ++GF
Sbjct: 98 QGDPIEWVSNHRYHHKHCETQRDPHSPTQGF 128
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESITST 550
F +L ++ I +T HR SH+S+ L+ L LA Q PI + +
Sbjct: 55 FPWLVFING-ICITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHK 113
Query: 551 AIRTQIHI-TQAVAFFYSHIGWLF 619
TQ + F++SH+ W+F
Sbjct: 114 HCETQRDPHSPTQGFWFSHMAWIF 137
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 490 FTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGF 591
F Q WV HR HH+++D+D DPH+ GF
Sbjct: 101 FALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGF 134
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESITST 550
FA + ++ + +T HR +H+S+K L+ A Q PI + +
Sbjct: 60 FAAMVGISTNLSITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119
Query: 551 AIRTQIHITQAV-AFFYSHIGWLFVRKHPEVKKKGKTN 661
+ + F++SH+ W+F + K G+ N
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRDN 157
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 490 FTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGF 591
F Q WV HR HH+++D+D DPH+ GF
Sbjct: 101 FALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGF 134
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESITST 550
F + + ++ +T HR +HKS+K L+ A Q PI + +
Sbjct: 60 FGVILAIVTSLSITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119
Query: 551 AIRTQIHITQAV-AFFYSHIGWLFVRKHPEVKKKGKTN 661
+ + F++SH+ W+F + K G+ N
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRDN 157
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 490 FTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGF 591
F Q WV HR HH+++D+D DPH+ GF
Sbjct: 101 FALQGDPLDWVSIHRFHHQFTDSDRDPHSPIEGF 134
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESITST 550
F ++ Y ++ +T HR +H+S+K L+ L F A Q P+ + +I
Sbjct: 60 FGFVLYALTSLSITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHRFHHQ 119
Query: 551 AIRTQIHITQAV-AFFYSHIGWLFVRKHPEVKKKGKTN 661
+ + F++SH+ W+ ++ + K G+ N
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVWWICDTRYIKYKCGGRNN 157
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 499 QSKTTHWVRDHRVHHKYSDTDADPHNASRGFLLFSYRL 612
Q WV HR HH+++D++ DPH+ GF FS+ L
Sbjct: 112 QGDPIDWVSTHRYHHQFTDSERDPHSPKEGF-WFSHLL 148
Score = 35.1 bits (77), Expect = 0.050
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 377 YLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESI--TST 550
+L Y +G+T HR +H+S+K L+ LL LA Q PI + + T
Sbjct: 70 FLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFT 129
Query: 551 AIRTQIHITQAVAFFYSHIGWLF 619
H + F++SH+ W++
Sbjct: 130 DSERDPH-SPKEGFWFSHLLWIY 151
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 499 QSKTTHWVRDHRVHHKYSDTDADPHNASRGF 591
Q WV HR HH+++D+D DPH+ GF
Sbjct: 104 QGDPLDWVSIHRFHHQFTDSDRDPHSPIEGF 134
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 499 QSKTTHWVRDHRVHHKYSDTDADPHNASRGF 591
Q WV HR HH++ D+D DPH+ GF
Sbjct: 175 QGNPIDWVSTHRYHHQFCDSDRDPHSPLDGF 205
Score = 31.5 bits (68), Expect = 0.61
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 362 SVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESI 541
SV F L V +G+T HR SHK++K L+ L + A Q PI + +
Sbjct: 129 SVAFG-LYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRY 187
Query: 542 TSTAIRTQIHITQAV-AFFYSHIGWLF 619
+ + F++SH+ W+F
Sbjct: 188 HHQFCDSDRDPHSPLDGFWFSHMNWMF 214
>At1g72270.1 68414.m08355 expressed protein
Length = 2777
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 720 FSNTCAETLMQDYRTNPESLLVFPFFLTSGCFLTN 616
F+ A + D + PE++ PF +T+GC L N
Sbjct: 310 FAKVRARWRILDKKWKPETIEFMPFVITTGCLLHN 344
>At1g61270.1 68414.m06905 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 451
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 579 CVMWICVRIAVLVMDSMVSNPMGGL 505
C+ WIC+ + VLV M+ P+GGL
Sbjct: 413 CINWICIILGVLV---MIIAPIGGL 434
>At5g52920.1 68418.m06567 pyruvate kinase, putative similar to
pyruvate kinase isozyme G, chloroplast precursor
[Nicotiana tabacum] SWISS-PROT:Q40546
Length = 579
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 497 PVKERPLVGFEEVILLCMICGTTVCELQL*RQSLLLHNTGTRIQL 363
P++E P++ EE+I LC G V +S+++H T TR ++
Sbjct: 357 PIEEVPILQ-EEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEV 400
>At5g01890.1 68418.m00108 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich receptor-like protein
(LRPKm1) - Malus domestica, EMBL:AF053127
Length = 967
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +1
Query: 379 PVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQ 501
P LC S R S +V P+ I SSNPTNG + TGQ
Sbjct: 563 PSLCGSVVNR---SCLSVHPKPIVLNPNSSNPTNGPALTGQ 600
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,957,646
Number of Sequences: 28952
Number of extensions: 359616
Number of successful extensions: 852
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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