Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30712.Seq
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 90 1e-18
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 90 1e-18
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 90 2e-18
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 90 2e-18
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 86 3e-17
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 86 3e-17
Z81510-6|CAB04161.3| 327|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z74473-2|CAA98949.2| 319|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z54235-3|CAA90973.2| 288|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine re... 28 7.4
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 27 9.8
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPSVGFAYLCYVAATIGVTAGAHRLWS 435
P + EIV++N+ + LH GLY AKW +V F +L YV G+TAGAHRLWS
Sbjct: 42 PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101
Query: 436 HKSYKARLPLQILLMVFLSLANQRAPIGFETIESITSTAIRTQIHITQAVASFILI*VG- 612
HKSYKA P++I LM+ ++A Q I + T F +G
Sbjct: 102 HKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGW 161
Query: 613 CSSXNTLKLRRKGKLIDLSDLFDXPALM 696
+++ +G +D+SDL P L+
Sbjct: 162 LLVRKHPQVKEQGAKLDMSDLLSDPVLV 189
Score = 87.8 bits (208), Expect = 7e-18
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKG 650
Q+ W RDHR HHK++DTDADPHN +RGFF++H+GWL VR HP+VK++G
Sbjct: 124 QNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQG 174
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPSVGFAYLCYVAATIGVTAGAHRLWS 435
P + EIV++N+ + LH GLY AKW +V F +L YV G+TAGAHRLWS
Sbjct: 42 PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101
Query: 436 HKSYKARLPLQILLMVFLSLANQRAPIGFETIESITSTAIRTQIHITQAVASFILI*VG- 612
HKSYKA P++I LM+ ++A Q I + T F +G
Sbjct: 102 HKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGW 161
Query: 613 CSSXNTLKLRRKGKLIDLSDLFDXPALM 696
+++ +G +D+SDL P L+
Sbjct: 162 LLVRKHPQVKEQGAKLDMSDLLSDPVLV 189
Score = 87.8 bits (208), Expect = 7e-18
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKG 650
Q+ W RDHR HHK++DTDADPHN +RGFF++H+GWL VR HP+VK++G
Sbjct: 124 QNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQG 174
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 89.8 bits (213), Expect = 2e-18
Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPSVGFAYLCYVAATIGVTAGAHRLWS 435
P + EIV++N+ + LHV GLY AKW + F++ YV + G+TAGAHRLWS
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100
Query: 436 HKSYKARLPLQILLMVFLSLANQRAPIGFETIESITSTAIRTQIHITQAVASFILI*VG- 612
HKSYKA P++I LM+ ++A Q I + T F +G
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160
Query: 613 CSSXNTLKLRRKGKLIDLSDLFDXPALM 696
+++ G +DLSDLF P L+
Sbjct: 161 LLVRKHPQVKEHGGKLDLSDLFSDPVLV 188
Score = 87.0 bits (206), Expect = 1e-17
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKG 650
Q+ W RDHR HHK++DTDADPHN +RGFF++H+GWL VR HP+VK+ G
Sbjct: 123 QNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHG 173
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 89.8 bits (213), Expect = 2e-18
Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPSVGFAYLCYVAATIGVTAGAHRLWS 435
P + EIV++N+ + LHV GLY AKW + F++ YV + G+TAGAHRLWS
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100
Query: 436 HKSYKARLPLQILLMVFLSLANQRAPIGFETIESITSTAIRTQIHITQAVASFILI*VG- 612
HKSYKA P++I LM+ ++A Q I + T F +G
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160
Query: 613 CSSXNTLKLRRKGKLIDLSDLFDXPALM 696
+++ G +DLSDLF P L+
Sbjct: 161 LLVRKHPQVKEHGGKLDLSDLFSDPVLV 188
Score = 87.0 bits (206), Expect = 1e-17
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKG 650
Q+ W RDHR HHK++DTDADPHN +RGFF++H+GWL VR HP+VK+ G
Sbjct: 123 QNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHG 173
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPSVGFAYLCYVAATIGVTAGAHRLWSHKSY 447
EIV+KN+ + + LH+ GLY AKW +VG+ +L + ++GVT GAHRLW+H++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 448 KARLPLQILLMVFLSLANQRAPIGFETIESITSTAIRTQIHITQAVASFILI*VGCSSXN 627
KA L ++ LM+ S+A Q I + T +G
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 628 TL-KLRRKGKLIDLSDLFDXPALM 696
+L+ +G +DLSDL++ P LM
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLM 180
Score = 76.6 bits (180), Expect = 2e-14
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +3
Query: 477 NGLSFTGQSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKG 650
N ++F Q+ W RDHR HHK++DTDADPH+ +RG F++H+GWL V+ H ++K +G
Sbjct: 110 NSIAF--QNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVKKHDQLKIQG 165
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPSVGFAYLCYVAATIGVTAGAHRLWSHKSY 447
EIV+KN+ + + LH+ GLY AKW +VG+ +L + ++GVT GAHRLW+H++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 448 KARLPLQILLMVFLSLANQRAPIGFETIESITSTAIRTQIHITQAVASFILI*VGCSSXN 627
KA L ++ LM+ S+A Q I + T +G
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 628 TL-KLRRKGKLIDLSDLFDXPALM 696
+L+ +G +DLSDL++ P LM
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLM 180
Score = 76.6 bits (180), Expect = 2e-14
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +3
Query: 477 NGLSFTGQSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKG 650
N ++F Q+ W RDHR HHK++DTDADPH+ +RG F++H+GWL V+ H ++K +G
Sbjct: 110 NSIAF--QNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVKKHDQLKIQG 165
>Z81510-6|CAB04161.3| 327|Caenorhabditis elegans Hypothetical
protein F21D9.2 protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTM-FYGLYLCCTTAKWPSVGFAYLC 384
PRE +I+Y LH++ F+GLY+ + A P+V F+ C
Sbjct: 234 PRETKILYVLWGFFALLHLSPNFFGLYITVSWAFAPAVSFSGQC 277
>Z74473-2|CAA98949.2| 319|Caenorhabditis elegans Hypothetical
protein F56H9.1 protein.
Length = 319
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 481 VFLSLANQRAPIGFETIESITSTAIRTQIHITQAVASFIL 600
+ ++LAN R PIGFE I ST QI I F++
Sbjct: 155 IIINLANCRVPIGFEHI-GYYSTPCNNQITIIVVSGIFLI 193
>Z54235-3|CAA90973.2| 288|Caenorhabditis elegans Hypothetical
protein C09G9.3 protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 351 EVAFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNG 482
E A + V ++CSS W Y+ T+V ++ +T+ PT G
Sbjct: 246 EYAENTATVQLICSSGQWTYTRMGSTLVLTTVECILTNP-PTGG 288
>AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 12 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 307 VDKYV*IYFYRRFHIL*VYH*RFDTIMF*TRIFYFGYNQSIIRLILCHFRI 155
V++ V YF ++H YH F I +G+N+ I+ + C F++
Sbjct: 101 VERVVAAYFPIQYHN---YHQSFPKIPIMITAIIYGFNEDIVLYVFCDFQL 148
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +2
Query: 35 GHYFKSQMEEAGIWEXRPRDGSSTPRE*SKV*RACSWSLHNAKMAQNQTYNGLIVTEIED 214
G F +M+E G + + + + + V R C + A N+TY+ L+ ++D
Sbjct: 355 GEVFVERMKELGFFSQKAKLLFTLDTDTIFVTRRCFAIVSKANKLINETYDKLVTVGVDD 414
Query: 215 SSLE 226
S+++
Sbjct: 415 SAIK 418
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,256,039
Number of Sequences: 27780
Number of extensions: 348514
Number of successful extensions: 927
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -