Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30712.Seq
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 56 2e-08
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 56 2e-08
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 56 3e-08
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 56 3e-08
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 54 9e-08
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 54 1e-07
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 54 1e-07
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 53 2e-07
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 52 5e-07
At5g52920.1 68418.m06567 pyruvate kinase, putative similar to py... 29 3.9
At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 29 3.9
At5g01890.1 68418.m00108 leucine-rich repeat transmembrane prote... 28 5.2
At3g48360.1 68416.m05278 speckle-type POZ protein-related conta... 27 9.0
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3
Query: 489 FTGQSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKGXTN 659
F Q WV HR HH+++D+D DPH+ GF++SH+ W+F + K G N
Sbjct: 101 FALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRDN 157
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3
Query: 489 FTGQSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKGXTN 659
F Q WV HR HH+++D+D DPH+ GF++SH+ W+F + K G N
Sbjct: 101 FALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRDN 157
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 352 KWPSVGFAYLCYVAATIGVTAGAHRLWSHKSYK 450
KW ++ F + + ++ +T HR +HKS+K
Sbjct: 54 KWEALRFGVILAIVTSLSITFSYHRNLTHKSFK 86
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 55.6 bits (128), Expect = 3e-08
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLF 617
Q WV +HR HHK+ +T DPH+ ++GF++SH+ W+F
Sbjct: 98 QGDPIEWVSNHRYHHKHCETQRDPHSPTQGFWFSHMAWIF 137
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 55.6 bits (128), Expect = 3e-08
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLF 617
Q WV HR HH+++D+D DPH+ + GF++SH+ WLF
Sbjct: 110 QGDPIDWVSTHRYHHQFTDSDRDPHSPNEGFWFSHLLWLF 149
Score = 34.3 bits (75), Expect = 0.079
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 355 WPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRAPI 516
WP++ A + Y +G+T HR +H+S+K L+ LA Q PI
Sbjct: 61 WPALRVALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPI 114
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 489 FTGQSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKGXTN 659
F Q WV HR HH+++D+D DPH+ G +SHI W+F + + K G N
Sbjct: 102 FALQGDPMDWVSIHRFHHQFTDSDRDPHSPKEGLLFSHILWIFDTQYIKYKCGGRDN 158
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 352 KWPSVGFAYLCYVAATIGVTAGAHRLWSHKSYK 450
KW ++ F + + T+ +T HR SH+S+K
Sbjct: 55 KWEALRFGLVLFALTTLSITFSFHRNLSHRSFK 87
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 53.6 bits (123), Expect = 1e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLF 617
Q WV HR HH++ D+D DPH+ GF++SH+ W+F
Sbjct: 175 QGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMF 214
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 WPSVGFAYLCY-VAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRAPI 516
W +V A+ Y V +G+T HR SHK++K L+ L + A Q PI
Sbjct: 125 WRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPI 179
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3
Query: 489 FTGQSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLFVRXHPEVKKKGXTN 659
F Q WV HR HH+++D+D DPH+ GF++SH+ W+ + + K G N
Sbjct: 101 FALQGDPLDWVSIHRFHHQFTDSDRDPHSPIEGFWFSHVWWICDTRYIKYKCGGRNN 157
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 352 KWPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRAPIGFETI 531
KW ++ F ++ Y ++ +T HR +H+S+K L+ L F A Q P+ + +I
Sbjct: 54 KWEALRFGFVLYALTSLSITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSI 113
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 53.2 bits (122), Expect = 2e-07
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLF 617
Q WV HR HH+++D+D DPH+ GF++SH+ W+F
Sbjct: 104 QGDPLDWVSIHRFHHQFTDSDRDPHSPIEGFWFSHVLWIF 143
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 51.6 bits (118), Expect = 5e-07
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 498 QSKSTHWVRDHRVHHKYSDTDADPHNASRGFFYSHIGWLF 617
Q WV HR HH+++D++ DPH+ GF++SH+ W++
Sbjct: 112 QGDPIDWVSTHRYHHQFTDSERDPHSPKEGFWFSHLLWIY 151
Score = 35.5 bits (78), Expect = 0.034
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 355 WPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRAPI 516
W ++ +L Y +G+T HR +H+S+K L+ LL LA Q PI
Sbjct: 63 WSALWVTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPI 116
>At5g52920.1 68418.m06567 pyruvate kinase, putative similar to
pyruvate kinase isozyme G, chloroplast precursor
[Nicotiana tabacum] SWISS-PROT:Q40546
Length = 579
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = -2
Query: 496 PVKERPLVGFEEVILLCMICGTTVCELQL*RQSLLLHNTGTRIQLKATSLS 344
P++E P++ EE+I LC G V +S+++H T TR ++ +++
Sbjct: 357 PIEEVPILQ-EEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIA 406
>At1g29080.1 68414.m03560 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 346
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 282 KYIHTYLSTR-YNVLWPISLLYDSEVAFSWIRVPVLCSSNDWR 407
+++ TY R NV P ++ +++ A++W VL ++ DWR
Sbjct: 95 EFLATYTGLRGVNVTSPFEVVNETKPAWNWTVSDVLGTNKDWR 137
>At5g01890.1 68418.m00108 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich receptor-like protein
(LRPKm1) - Malus domestica, EMBL:AF053127
Length = 967
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 378 PVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKST 512
P LC S R S +V P+ I SSNPTNG + TGQ + +
Sbjct: 563 PSLCGSVVNR---SCLSVHPKPIVLNPNSSNPTNGPALTGQIRKS 604
>At3g48360.1 68416.m05278 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 364
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 617 EQPTYMRIKEATACVMWICVRIAVLVMDSMV 525
EQ YM++ EA C+ IC + LV S V
Sbjct: 213 EQDLYMQLSEAMECIEHICTQGCTLVGPSNV 243
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,357,891
Number of Sequences: 28952
Number of extensions: 322868
Number of successful extensions: 799
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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