Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30710.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   0.87 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.5  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 260 RGKEKIIFLYSTTTSITLXAAPTPSNKXYNSTSTKPXP 373
           R  E ++ L  +T S +  + P+PS     ST+  P P
Sbjct: 112 RSLEDLLALDESTVSSSTSSIPSPSTTDDLSTNPTPPP 149


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -3

Query: 182 INLVLLQLNIMVGKLLTHSFTSYLMKVLISSINYYTPTLQNVCMY 48
           ++ ++ QLN   G +L   FTS+ + +++S        + N  M+
Sbjct: 222 LSKLIKQLNATYGLILLLMFTSHFIFIVVSIFYMSAYLISNPIMW 266


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 239 QLVDIVFLXTRNLLTPLNFINLVLLQLNIMVGKLLTH 129
           QLV I  L T+   T  +F NL     ++M+  L T+
Sbjct: 329 QLVAIRLLNTKLQFTAKDFFNLDWTFCHMMIAALTTY 365


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 200 VGFE*XETQYLQVVNQH*MERGKEKIIFLYSTTTSITLXAAPTPSNKXYNSTST 361
           V F+    +  Q   QH  ++  EK   L + +  I    +PTP +   N+TST
Sbjct: 115 VWFKNRRAKCRQQQKQHNQQQSVEKSSKLKNKSAPILTKTSPTPVS-INNNTST 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,963
Number of Sequences: 336
Number of extensions: 1720
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)