Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30710.Seq
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 29 2.5
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 28 4.3
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 27 5.7
U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical pr... 27 7.6
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 27 7.6
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 27 7.6
AF039036-2|AAK68290.1| 115|Caenorhabditis elegans Neuropeptide-... 27 7.6
AF039036-1|AAB94167.1| 129|Caenorhabditis elegans Neuropeptide-... 27 7.6
Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical p... 27 10.0
Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical p... 27 10.0
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 27 10.0
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 291 EYKNIIFSLPRSIQC*LTTCRYCVSXYSKPTD 196
EY++ +PR + C T C C++ KPT+
Sbjct: 189 EYEDTKERVPRVLDCGHTICHECITRIHKPTE 220
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 482 ISVVXFVLEEL*WWNVSIEPVEDVAAVIPRGHRGSRPAPV 363
+S+ +L L WW V ++P+ A +I G PA V
Sbjct: 815 LSICAGILGFLSWWKVDLDPITMAAMIISIGFSVDIPAHV 854
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 482 ISVVXFVLEEL*WWNVSIEPVEDVAAVIPRGHRGSRPAPV 363
+S+ +L L WW V ++P+ A +I G PA V
Sbjct: 815 LSICAGILGFLSWWKVDLDPITMAAMIISIGFSVDIPAHV 854
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 290 STTTSITLXAAPTPSNKXYNSTSTKPXPVES 382
STTTS T PT S+ +T+T P PV S
Sbjct: 450 STTTSATTLV-PTTSSSTTTTTTTTPVPVTS 479
>U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical
protein T27F7.2c protein.
Length = 331
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 290 STTTSITLXAAPTPSNKXYNSTSTKPXP 373
STTTS + A+ + SN +ST T P P
Sbjct: 110 STTTSTSSVASSSSSNGSSSSTDTSPVP 137
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 290 STTTSITLXAAPTPSNKXYNSTSTKPXP 373
STTTS + A+ + SN +ST T P P
Sbjct: 479 STTTSTSSVASSSSSNGSSSSTDTSPVP 506
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 290 STTTSITLXAAPTPSNKXYNSTSTKPXP 373
STTTS + A+ + SN +ST T P P
Sbjct: 489 STTTSTSSVASSSSSNGSSSSTDTSPVP 516
>AF039036-2|AAK68290.1| 115|Caenorhabditis elegans
Neuropeptide-like protein protein9, isoform b protein.
Length = 115
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 253 NGARQRKDYIFILYDYLYHARGGSHAFK*XL*L-NVNKTGAGR 378
N ++D L YLY RGG AF L +K G GR
Sbjct: 56 NAGNSKRDQAAALPYYLYEKRGGGRAFNHNANLFRFDKRGGGR 98
>AF039036-1|AAB94167.1| 129|Caenorhabditis elegans
Neuropeptide-like protein protein9, isoform a protein.
Length = 129
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 253 NGARQRKDYIFILYDYLYHARGGSHAFK*XL*L-NVNKTGAGR 378
N ++D L YLY RGG AF L +K G GR
Sbjct: 56 NAGNSKRDQAAALPYYLYEKRGGGRAFNHNANLFRFDKRGGGR 98
>Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 227 YLQVVNQH*MERGKEKIIFLYSTTTSITLXAAPTPSNKXYNST 355
+L + +H + G E+ + ST +S+T AP P+ K ST
Sbjct: 35 HLAAIGRHSSQGGSERHL---STESSVTQAPAPVPTTKRSRST 74
>Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 227 YLQVVNQH*MERGKEKIIFLYSTTTSITLXAAPTPSNKXYNST 355
+L + +H + G E+ + ST +S+T AP P+ K ST
Sbjct: 101 HLAAIGRHSSQGGSERHL---STESSVTQAPAPVPTTKRSRST 140
>Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 227 YLQVVNQH*MERGKEKIIFLYSTTTSITLXAAPTPSNKXYNST 355
+L + +H + G E+ + ST +S+T AP P+ K ST
Sbjct: 35 HLAAIGRHSSQGGSERHL---STESSVTQAPAPVPTTKRSRST 74
>Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 227 YLQVVNQH*MERGKEKIIFLYSTTTSITLXAAPTPSNKXYNST 355
+L + +H + G E+ + ST +S+T AP P+ K ST
Sbjct: 101 HLAAIGRHSSQGGSERHL---STESSVTQAPAPVPTTKRSRST 140
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -3
Query: 233 VDIVFLXTRNLLTPLNFINLVLLQLNIMVGKLLTHSFTSYLMKVLISSINYYTPTLQNVC 54
V I FL ++ PLNF+ L+LNI G + + Y + ++ Y Q +
Sbjct: 151 VSIYFLPVQSARPPLNFLYGPNLELNIYFGARMRLTQLGYGLTLVEEKFEYECEATQKLL 210
Query: 53 M 51
+
Sbjct: 211 L 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,297,868
Number of Sequences: 27780
Number of extensions: 161832
Number of successful extensions: 484
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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