Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30708.Seq
         (431 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX641140-1|CAE46062.1|  863|Homo sapiens hypothetical protein pr...    31   1.3  
BC113587-1|AAI13588.1|  972|Homo sapiens chromosome 12 open read...    31   1.3  
BC113585-1|AAI13586.1|  972|Homo sapiens chromosome 12 open read...    31   1.3  
BC034357-1|AAH34357.1|  875|Homo sapiens C12orf30 protein protein.     31   1.3  
AK023151-1|BAB14432.1|  852|Homo sapiens protein ( Homo sapiens ...    31   1.3  
AB054990-1|BAC80174.1|  972|Homo sapiens P120 protein.                 31   1.3  

>BX641140-1|CAE46062.1|  863|Homo sapiens hypothetical protein
           protein.
          Length = 863

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 299 DCSSLSRNILRRASDSGLFYGHSVTAFDSVFLLL 198
           +C++LSR +L + SD   FY   +T FDSVF L+
Sbjct: 251 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 281


>BC113587-1|AAI13588.1|  972|Homo sapiens chromosome 12 open reading
           frame 30 protein.
          Length = 972

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 299 DCSSLSRNILRRASDSGLFYGHSVTAFDSVFLLL 198
           +C++LSR +L + SD   FY   +T FDSVF L+
Sbjct: 247 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 277


>BC113585-1|AAI13586.1|  972|Homo sapiens chromosome 12 open reading
           frame 30 protein.
          Length = 972

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 299 DCSSLSRNILRRASDSGLFYGHSVTAFDSVFLLL 198
           +C++LSR +L + SD   FY   +T FDSVF L+
Sbjct: 247 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 277


>BC034357-1|AAH34357.1|  875|Homo sapiens C12orf30 protein protein.
          Length = 875

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 299 DCSSLSRNILRRASDSGLFYGHSVTAFDSVFLLL 198
           +C++LSR +L + SD   FY   +T FDSVF L+
Sbjct: 247 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 277


>AK023151-1|BAB14432.1|  852|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13089 fis, clone NT2RP3002108, weakly similar to
           DEC1 PROTEIN. ).
          Length = 852

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 299 DCSSLSRNILRRASDSGLFYGHSVTAFDSVFLLL 198
           +C++LSR +L + SD   FY   +T FDSVF L+
Sbjct: 127 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 157


>AB054990-1|BAC80174.1|  972|Homo sapiens P120 protein.
          Length = 972

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 299 DCSSLSRNILRRASDSGLFYGHSVTAFDSVFLLL 198
           +C++LSR +L + SD   FY   +T FDSVF L+
Sbjct: 247 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 277


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,439,513
Number of Sequences: 237096
Number of extensions: 1205754
Number of successful extensions: 2792
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2792
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)