Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30704.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   0.80 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   1.9  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   1.9  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   1.9  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   7.5  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    23   7.5  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   9.9  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   9.9  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   9.9  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -3

Query: 128 ILCSHWVSAGSCPCXRQRXSYSRHFLLYF*HKIHFKXAVT 9
           ++C  +     CP  R R +Y+R   L    + HF   +T
Sbjct: 125 VVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLT 164


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 201 VDDIGDVTVTNDGATILXCW 260
           +DD  + T+TND AT++  W
Sbjct: 34  MDDALNTTLTNDKATLIQVW 53


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 201 VDDIGDVTVTNDGATILXCW 260
           +DD  + T+TND AT++  W
Sbjct: 34  MDDALNTTLTNDKATLIQVW 53


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 201 VDDIGDVTVTNDGATILXCW 260
           +DD  + T+TND AT++  W
Sbjct: 12  MDDALNTTLTNDKATLIQVW 31


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 467 NLTVTVESLGRPSLST 514
           NLT+T+E L RP+ ST
Sbjct: 62  NLTLTLEELLRPNSST 77


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription
          factor Deformed protein.
          Length = 59

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 83 RQRXSYSRHFLLYF*HKIHFKXAVT 9
          RQR +Y+RH +L    + H+   +T
Sbjct: 3  RQRTAYTRHQILELEKEFHYNXYLT 27


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 146 YSKHSKXLPWXXWSG 190
           Y+  SK  PW  W+G
Sbjct: 583 YTHRSKGNPWPRWTG 597


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 146 YSKHSKXLPWXXWSG 190
           Y+  SK  PW  W+G
Sbjct: 583 YTHRSKGNPWPRWTG 597


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 146 YSKHSKXLPWXXWSG 190
           Y+  SK  PW  W+G
Sbjct: 469 YTHRSKGNPWPRWTG 483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,669
Number of Sequences: 2352
Number of extensions: 7860
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)