Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30704.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 128 3e-30
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 128 3e-30
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 80 1e-15
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 80 1e-15
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 80 1e-15
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 74 9e-14
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 66 2e-11
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 66 2e-11
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 66 2e-11
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 63 2e-10
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 53 2e-07
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 50 1e-06
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 50 1e-06
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 32 0.27
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 29 1.9
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.3
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 28 5.8
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 128 bits (309), Expect = 3e-30
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +2
Query: 248 IXMLXXXXPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+ L PA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 428 RXXCKEAVKYIQDNLTVTVESLGRPSL 508
R CKEAVKYI +N++ T +S+GR S+
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQSV 152
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/58 (51%), Positives = 35/58 (60%)
Frame = +3
Query: 78 LSXAGTRSCXXPVRTQXXXXXXXXXXXXXXSLGPXGLDKMLVDDIGDVTVTNDGATIL 251
L+ G R+ +R+Q SLGP GLDKMLVDD+GDV VTNDGATIL
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATIL 66
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +1
Query: 508 VNTAXTTMSSKLIGADADFFSEMVVDAAQA 597
VN A T+MSSK+IG DADFF E+VVDAA+A
Sbjct: 153 VNAAKTSMSSKIIGPDADFFGELVVDAAEA 182
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 128 bits (309), Expect = 3e-30
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +2
Query: 248 IXMLXXXXPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+ L PA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 428 RXXCKEAVKYIQDNLTVTVESLGRPSL 508
R CKEAVKYI +N++ T +S+GR S+
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQSV 152
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/58 (51%), Positives = 35/58 (60%)
Frame = +3
Query: 78 LSXAGTRSCXXPVRTQXXXXXXXXXXXXXXSLGPXGLDKMLVDDIGDVTVTNDGATIL 251
L+ G R+ +R+Q SLGP GLDKMLVDD+GDV VTNDGATIL
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATIL 66
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +1
Query: 508 VNTAXTTMSSKLIGADADFFSEMVVDAAQA 597
VN A T+MSSK+IG DADFF E+VVDAA+A
Sbjct: 153 VNAAKTSMSSKIIGPDADFFGELVVDAAEA 182
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYR 430
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYR 128
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
Frame = +3
Query: 168 SLGPXGLDKMLV----DDIGDVTVTNDGATIL 251
+LGP G+DK+L+ + G + VTNDGATIL
Sbjct: 37 TLGPKGMDKILISGNPESAGGIKVTNDGATIL 68
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYR 430
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYR 128
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
Frame = +3
Query: 168 SLGPXGLDKMLV----DDIGDVTVTNDGATIL 251
+LGP G+DK+L+ + G + VTNDGATIL
Sbjct: 37 TLGPKGMDKILISGNPESAGGIKVTNDGATIL 68
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYR 430
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYR 128
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
Frame = +3
Query: 168 SLGPXGLDKMLV----DDIGDVTVTNDGATIL 251
+LGP G+DK+L+ + G + VTNDGATIL
Sbjct: 37 TLGPKGMDKILISGNPESAGGIKVTNDGATIL 68
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 73.7 bits (173), Expect = 9e-14
Identities = 31/72 (43%), Positives = 51/72 (70%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAV 451
PAAK ++E+A+ QDEE GDGTTSV+I+A E++ +A ++ K HPT II YR ++ +
Sbjct: 77 PAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMI 136
Query: 452 KYIQDNLTVTVE 487
++ ++ + TV+
Sbjct: 137 QWSENKFSKTVD 148
Score = 35.1 bits (77), Expect = 0.038
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
SLGP + KML+D +G + +TNDG IL
Sbjct: 42 SLGPRAMLKMLMDPMGGIVMTNDGNAIL 69
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2
Query: 278 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAVK 454
AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+ CK+A++
Sbjct: 89 AKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
SLGP GLDKMLV GDVT+TNDGATI+
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIM 79
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2
Query: 278 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAVK 454
AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+ CK+A++
Sbjct: 89 AKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
SLGP GLDKMLV GDVT+TNDGATI+
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIM 79
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2
Query: 278 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAVK 454
AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+ CK+A++
Sbjct: 89 AKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
SLGP GLDKMLV GDVT+TNDGATI+
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIM 79
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +2
Query: 248 IXMLXXXXPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+ +L PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 428 RXXCKEAVKYIQD 466
C++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
+LGP GLDK++VD G T++NDGATIL
Sbjct: 39 TLGPRGLDKLIVDSKGATTISNDGATIL 66
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 478 NSRVTWQAVSVNTAXTTMSSKLIGADADFFSEMVVDA 588
N + + V A TT+SSKL+ + FF+ M+VDA
Sbjct: 144 NGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA 180
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +2
Query: 248 IXMLXXXXPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
+ +L PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 428 RXXCKEAVKYIQD 466
C++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
+LGP GLDK++VD G T++NDGATIL
Sbjct: 39 TLGPRGLDKLIVDSKGATTISNDGATIL 66
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 478 NSRVTWQAVSVNTAXTTMSSKLIGADADFFSEMVVDA 588
N + + V A TT+SSKL+ + FF+ M+VDA
Sbjct: 144 NGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA 180
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAV 451
P AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I ++ EA
Sbjct: 85 PTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAE 144
Query: 452 KYIQD 466
K + +
Sbjct: 145 KILDE 149
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
SLGP G+DKM+ GDVT+TNDGATIL
Sbjct: 50 SLGPRGMDKMIQSGNGDVTITNDGATIL 77
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAV 451
P AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I ++ EA
Sbjct: 85 PTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAE 144
Query: 452 KYIQD 466
K + +
Sbjct: 145 KILDE 149
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
SLGP G+DKM+ GDVT+TNDGATIL
Sbjct: 50 SLGPRGMDKMIQSGNGDVTITNDGATIL 77
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/63 (31%), Positives = 43/63 (68%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAV 451
PAA++++ ++Q++++GD T +VVI+AA LL++A L+ + P + +GY ++A+
Sbjct: 80 PAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKAL 139
Query: 452 KYI 460
+ +
Sbjct: 140 EIL 142
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 174 GPXGLDKMLVDDIGDVTVTNDGATIL 251
GP G++KM+++ I + VTND ATIL
Sbjct: 47 GPNGMNKMVINHIEKLFVTNDAATIL 72
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
P A ++ + + QD+ GDGTTS V++ ELLK A+ LV +HP + G+
Sbjct: 72 PTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
+LGP G KMLV GD+ +T DG +L
Sbjct: 37 NLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 427
P A ++ + + QD+ GDGTTS V++ ELLK A+ LV +HP + G+
Sbjct: 72 PTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 168 SLGPXGLDKMLVDDIGDVTVTNDGATIL 251
+LGP G KMLV GD+ +T DG +L
Sbjct: 37 NLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 278 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVK 391
AK++ ++A +EE GDGTT ++A + K E ++
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIR 123
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 278 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADE 382
AK++ ++A +EE GDGTT ++ + K E
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFE 120
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 314 EEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAV-KYIQDNLTVTV-E 487
+ G TS + ++ +E+ + T I GY C++A+ + +L T+ E
Sbjct: 557 QSFGRNLTSTELYDVHAGEDYEEITAAGYNQTGNIMGYTVDCRDAIGGTVYGHLPNTIPE 616
Query: 488 SLGRPSLSTQPXQP 529
+PS ST P P
Sbjct: 617 EPTKPSQSTSPSTP 630
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRXXCKEAV 451
P A+++ E +++++ T V+ ++ L K ADE+V+ +I T + C
Sbjct: 338 PYARMISENLGKENDKM-QTLTETVVESSGLEKGADEMVRNEIINTVFNAAEEDPCTSNS 396
Query: 452 KYIQDNLTVTVESLGRPSLSTQPXQP 529
D ++ESLG S +P
Sbjct: 397 LEKYDKYRPSLESLGIKRTSEPEPEP 422
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 272 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKI 400
P A +A +E+GDG V ++A+E+ N E+ KT++
Sbjct: 90 PPATGKTAIALAMSQELGDGVPFVPLVASEVFSN--EVKKTEV 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,939,779
Number of Sequences: 27780
Number of extensions: 176324
Number of successful extensions: 374
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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