Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30702.Seq
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.59 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   9.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 624  YYYTGHSHSLKYAKFSLHSWFSK 556
            YYY G  +    A FSL+ W  K
Sbjct: 2530 YYYPGDVYDYFNANFSLNYWIEK 2552


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +1

Query: 112 IAGLSIKNVVVLL*CRPLTCAQILKGRQTFI 204
           +  LS+ +++VLL C P    ++    +T++
Sbjct: 107 LVNLSVADLMVLLVCTPTVLVEVNSRPETWV 137


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +1

Query: 112 IAGLSIKNVVVLL*CRPLTCAQILKGRQTFI 204
           +  LS+ +++VLL C P    ++    +T++
Sbjct: 107 LVNLSVADLMVLLVCTPTVLVEVNSRPETWV 137


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 188 PFNICAHVSGRHYSSTTTFLIDSPAISLRTQTCT 87
           P ++     G+  +STT+  + SPA S  + + T
Sbjct: 146 PLSVSTSPPGKPATSTTSQNLSSPASSTSSTSST 179


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 122 YLSRMLLYYCNAGHSHARK 178
           Y   +L   CN GH   RK
Sbjct: 321 YCMTLLYIICNEGHHATRK 339


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 122 YLSRMLLYYCNAGHSHARK 178
           Y   +L   CN GH   RK
Sbjct: 321 YCMTLLYIICNEGHHATRK 339


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 542 QTSMSANCDPSLVS 501
           Q +MSA  DPS+VS
Sbjct: 95  QAAMSAATDPSVVS 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,781
Number of Sequences: 336
Number of extensions: 3724
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)