Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30702.Seq
         (697 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019895-1|AAH19895.1|  373|Homo sapiens FBLIM1 protein protein.       31   3.9  
AY180161-1|AAO49012.1|  373|Homo sapiens migfilin protein.             31   3.9  
AL450998-6|CAH70854.1|  373|Homo sapiens filamin binding LIM pro...    31   3.9  
AL450998-5|CAH70853.1|  276|Homo sapiens filamin binding LIM pro...    31   3.9  
AL133035-1|CAB61365.1|  200|Homo sapiens hypothetical protein pr...    31   3.9  
AK027444-1|BAB55115.1|  276|Homo sapiens protein ( Homo sapiens ...    31   3.9  
AK075474-1|BAC11642.1|  269|Homo sapiens protein ( Homo sapiens ...    31   5.2  

>BC019895-1|AAH19895.1|  373|Homo sapiens FBLIM1 protein protein.
          Length = 373

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 492 CVTSCAQDCEGNERFAIFINRDVYCVAYLHQKKSHKNSMAVNDAWERI-QNSFSLQC 325
           CVT CA+ C G+E FA+    +VYC+   ++K +   S+  N    R  +++F ++C
Sbjct: 269 CVT-CAR-CIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIEC 323


>AY180161-1|AAO49012.1|  373|Homo sapiens migfilin protein.
          Length = 373

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 492 CVTSCAQDCEGNERFAIFINRDVYCVAYLHQKKSHKNSMAVNDAWERI-QNSFSLQC 325
           CVT CA+ C G+E FA+    +VYC+   ++K +   S+  N    R  +++F ++C
Sbjct: 269 CVT-CAR-CIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIEC 323


>AL450998-6|CAH70854.1|  373|Homo sapiens filamin binding LIM
           protein 1 protein.
          Length = 373

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 492 CVTSCAQDCEGNERFAIFINRDVYCVAYLHQKKSHKNSMAVNDAWERI-QNSFSLQC 325
           CVT CA+ C G+E FA+    +VYC+   ++K +   S+  N    R  +++F ++C
Sbjct: 269 CVT-CAR-CIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIEC 323


>AL450998-5|CAH70853.1|  276|Homo sapiens filamin binding LIM
           protein 1 protein.
          Length = 276

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 492 CVTSCAQDCEGNERFAIFINRDVYCVAYLHQKKSHKNSMAVNDAWERI-QNSFSLQC 325
           CVT CA+ C G+E FA+    +VYC+   ++K +   S+  N    R  +++F ++C
Sbjct: 172 CVT-CAR-CIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIEC 226


>AL133035-1|CAB61365.1|  200|Homo sapiens hypothetical protein
           protein.
          Length = 200

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 492 CVTSCAQDCEGNERFAIFINRDVYCVAYLHQKKSHKNSMAVNDAWERI-QNSFSLQC 325
           CVT CA+ C G+E FA+    +VYC+   ++K +   S+  N    R  +++F ++C
Sbjct: 96  CVT-CAR-CIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIEC 150


>AK027444-1|BAB55115.1|  276|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14538 fis, clone NT2RM2001324, weakly similar to
           ZYXIN. ).
          Length = 276

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 492 CVTSCAQDCEGNERFAIFINRDVYCVAYLHQKKSHKNSMAVNDAWERI-QNSFSLQC 325
           CVT CA+ C G+E FA+    +VYC+   ++K +   S+  N    R  +++F ++C
Sbjct: 172 CVT-CAR-CIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIEC 226


>AK075474-1|BAC11642.1|  269|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0168 fis, clone PLACE1011146, moderately
           similar to CAB2 protein. ).
          Length = 269

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -2

Query: 675 WKCTDEIN-G*LFITINFYYYTGHSHSLKYAKFSLHSWFSKLCFLT 541
           W C D+     +++T+  Y   GH     + K SL++WF    F T
Sbjct: 62  WTCRDDCKYECMWVTVGLYLQEGHKVPQFHGKVSLNAWFWPTVFHT 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,429,162
Number of Sequences: 237096
Number of extensions: 2099246
Number of successful extensions: 3613
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3606
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)