Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30699.Seq
         (554 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   6.7  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   6.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   8.9  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 387 SWARSDAXQPPANXYRIVLGXL 322
           SW  S   +PP+N Y+   G L
Sbjct: 49  SWWSSHLTEPPSNFYQATHGLL 70


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 387 SWARSDAXQPPANXYRIVLGXL 322
           SW  S   +PP+N Y+   G L
Sbjct: 49  SWWSSHLTEPPSNFYQATHGLL 70


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 508 PPPXDXAYXNXTPRSIPP 455
           PPP   A  N  P+ +PP
Sbjct: 533 PPPPGGAVLNIPPQFLPP 550


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,731
Number of Sequences: 2352
Number of extensions: 9210
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)