Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30692.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   5.7  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   5.7  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.9  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 424 PQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSS 299
           P L    ++  L+ H  L+     IP+  D H+G  S H SS
Sbjct: 673 PSLKEDNSLLSLIGHFFLQTP---IPNNGDVHQGGDSNHTSS 711


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 370 KDTERWIPHQKDAHEG 323
           K+T RW+  ++D  EG
Sbjct: 124 KETARWVKFEEDVEEG 139


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 520 GMRAVEFKVVETDPSTILH 576
           GMRA  F+  ET+   +LH
Sbjct: 113 GMRAPSFRCTETNGQLVLH 131


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 513 PXGHARRRVQSGRNRSINHF 572
           P G   R  Q+GR   +NH+
Sbjct: 164 PRGWEERSAQNGRTYYVNHY 183


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 379 ISLKDTERWIPHQKDAHE 326
           ++L+D   W+PH K+  E
Sbjct: 735 VTLQDKLSWLPHVKEVTE 752



 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 84  IXRXXSSVARTDPTVSLSKKQSAMTTQSW 170
           + +  S+V RTD   ++ K++   T + W
Sbjct: 849 VYQRLSAVNRTDTRANIRKQERQATIEQW 877


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,709
Number of Sequences: 2352
Number of extensions: 11442
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)