Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30689.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   151   7e-37
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   151   7e-37
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    30   1.5  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    30   1.5  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  151 bits (365), Expect = 7e-37
 Identities = 68/88 (77%), Positives = 80/88 (90%)
 Frame = +1

Query: 4   RREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEK 183
           RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLGKEK
Sbjct: 5   RREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEK 64

Query: 184 FSMVXIRVTVKGGGHVAQVYAIRQLFQR 267
           F+ V IRV V GGGHVAQ+YAIRQ   +
Sbjct: 65  FAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score =  107 bits (258), Expect = 6e-24
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = +3

Query: 255 AISKALIAFYQXYVXEASKXXIKDILVQYDRSLLVADPRRXEPKKFGGPGARAXYQKSYR 434
           AISKAL+AFYQ YV EASK  IKDILVQYDR+LLV DPRR EPKKFGGPGARA YQKSYR
Sbjct: 89  AISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  151 bits (365), Expect = 7e-37
 Identities = 68/88 (77%), Positives = 80/88 (90%)
 Frame = +1

Query: 4   RREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEK 183
           RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLGKEK
Sbjct: 5   RREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEK 64

Query: 184 FSMVXIRVTVKGGGHVAQVYAIRQLFQR 267
           F+ V IRV V GGGHVAQ+YAIRQ   +
Sbjct: 65  FAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score =  107 bits (258), Expect = 6e-24
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = +3

Query: 255 AISKALIAFYQXYVXEASKXXIKDILVQYDRSLLVADPRRXEPKKFGGPGARAXYQKSYR 434
           AISKAL+AFYQ YV EASK  IKDILVQYDR+LLV DPRR EPKKFGGPGARA YQKSYR
Sbjct: 89  AISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 43  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVKG 219
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    V +   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 220 GGHVAQVYAIR 252
           GG   Q  AIR
Sbjct: 334 GGPSGQAGAIR 344



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +3

Query: 351 LLVADPRRXEPKKFGGPGARAXY 419
           LL  D RR E KKFG  GAR  Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 43  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVKG 219
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    V +   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 220 GGHVAQVYAIR 252
           GG   Q  AIR
Sbjct: 334 GGPSGQAGAIR 344



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +3

Query: 351 LLVADPRRXEPKKFGGPGARAXY 419
           LL  D RR E KKFG  GAR  Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,813,364
Number of Sequences: 53049
Number of extensions: 386267
Number of successful extensions: 933
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)