Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30688.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    47   4e-07
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   1.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  
AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450 pr...    23   6.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.3  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.3  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 47.2 bits (107), Expect = 4e-07
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
 Frame = -2

Query: 506 NSVLMQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTIPS---------PPADT 354
           NS+LMQ+QADL GIPV+R  + E  ALG A+ A +A  V    + +            +T
Sbjct: 430 NSLLMQLQADLSGIPVLRTEVHEPAALGTAMAAAQANGVDLYKLEAEIRGYAGVQSHHET 489

Query: 353 FLPALTNXXXXXXXXXXXEALNKCMGWTDTKNEMSTQKNQIELL 222
           FLP  T             A+ + +GW  +K   +    +  LL
Sbjct: 490 FLPTTTEEERNARYTKWKMAVQRSLGWAVSKKSEAMTDERYSLL 533



 Score = 33.5 bits (73), Expect = 0.006
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -3

Query: 646 LSERTRRQHIVRAALEAVCHQTR 578
           L+  T + H VRAALEAVC QTR
Sbjct: 382 LTSFTTKHHFVRAALEAVCFQTR 404


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 600 RPCVTRRAPWRTRWLQTARP*GNSSPTEGWRELSSD 493
           RP   RRAP   R     R  G    + GWR+  SD
Sbjct: 167 RPYRVRRAPRAERRHPYTRRSGGQQRSAGWRQSRSD 202


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 23/66 (34%), Positives = 32/66 (48%)
 Frame = +2

Query: 353 MYRPVGWVLSWATHALRDLRQWPPPGLYFPS*GDE*LVYPVNQPASASELSSRHPSVGEE 532
           +Y P    + W  H +RDLR W    +Y  S G        NQP SASE++  +P+    
Sbjct: 556 LYMPNRERVLWPAHNVRDLRLWTE--VYLGSWGGH------NQP-SASEVAD-YPTA--S 603

Query: 533 LPQGRA 550
           +P G A
Sbjct: 604 VPAGGA 609


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 23/66 (34%), Positives = 32/66 (48%)
 Frame = +2

Query: 353 MYRPVGWVLSWATHALRDLRQWPPPGLYFPS*GDE*LVYPVNQPASASELSSRHPSVGEE 532
           +Y P    + W  H +RDLR W    +Y  S G        NQP SASE++  +P+    
Sbjct: 556 LYMPNRERVLWPAHNVRDLRLWTE--VYLGSWGGH------NQP-SASEVAD-YPTA--S 603

Query: 533 LPQGRA 550
           +P G A
Sbjct: 604 VPTGGA 609


>AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 405 SRNACVAHDNTQPTGRYIP 349
           +R AC++ DN Q   R++P
Sbjct: 17  TRVACLSEDNFQQADRFLP 35


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 392 VWPTTIPSPPADTFLPAL 339
           V+P+ +P  P D++ PAL
Sbjct: 302 VFPSVVPLVPLDSYHPAL 319


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 17/61 (27%), Positives = 22/61 (36%)
 Frame = -1

Query: 537 GNSSPTEGWRELSSDADAG*FTGYTSHSSPHDGKYSPGGGHCRRSRNACVAHDNTQPTGR 358
           G     EGW   + D  A   T       P  G+   G G C      C   ++ + TGR
Sbjct: 614 GQCECREGWTGPACDCRASNETCMP----PGGGELCSGHGTCECGTCRCTVTEDGRYTGR 669

Query: 357 Y 355
           Y
Sbjct: 670 Y 670


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,156
Number of Sequences: 2352
Number of extensions: 15273
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)