Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30687.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.79 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.5  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   7.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.7  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 608 FGWLFYFCNHYCTFLPMILVISCKFFKWKLTNYTEFN 498
           F  +F+F    C F+ +I+V     F+ +  NY + N
Sbjct: 71  FTHIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDSN 107


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 253 SVEFANKPILMHQIEALVEAGVTQV 327
           SV F NKP+++  +  L+  GV  V
Sbjct: 178 SVFFGNKPVILTVVLPLLACGVMVV 202


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 578 YCTFLPMILVISCKF 534
           YC FL M L   C+F
Sbjct: 65  YCLFLEMTLAHHCRF 79


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 609 YGVVVYDDNGQIESFI 656
           +G +  DD G +ESF+
Sbjct: 331 FGFLEIDDQGTVESFV 346


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 224 RPLTLSRPKPRSNSPTNL 277
           RP  +SR KPR   PT +
Sbjct: 256 RPTKVSRRKPRPPRPTQV 273


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 65  IQPN*FLKECVC 30
           I P  FLKEC C
Sbjct: 72  ITPTGFLKECYC 83


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 194 ILVGGYGTRLRPLTLSRPKPRSNSPTNL 277
           I++  +GTR  P   ++PK     P  L
Sbjct: 327 IIIDVHGTRRGPKIKTQPKAEEAKPETL 354


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +3

Query: 534  ELARYHKNHGKEGTIVVTKVEEPSKYGVVV 623
            E   + +  GKE  + ++ ++  ++Y VVV
Sbjct: 1047 ETVEFGREEGKEHHLKISNLKTYTQYSVVV 1076


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 83  KNFCISWTGKRSISVE*IQYQFKMCGTDKKLEEIRAL 193
           KNFC  +  K+ I +  + YQ     +  K+  +++L
Sbjct: 527 KNFCFGFITKQLIFMIFVTYQLYCWSSFLKISVLQSL 563


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,468
Number of Sequences: 336
Number of extensions: 3116
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)